Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc76g00019 ATGGCACTAACTATTTCGGTTCTAATGCAATTGCCATATGAGTTTAACTCAACCCTTTACCTTTCAATAGTAGTTGCCATCATTAGCATCATTCTTGTGGGTAATTATTTCACAAGAAGAAGCGAATTCATTAATCTTCCACCATCACCACCAAAGCTACCTTTCATTGGAAACCTTCACCAATTAGGAACATTACCACACCGTTCTTTCAAAGAACTCTCCAATAAGCATGGCCCTCTCATGTTCCTTCAATTAGGGCAAATCCCAACATTAGTGGTTTCCTCCGCCAACATGGCTAAAGAAATTATAAAAAACCATGATATTGTTTTTTCAAGCCGGCCTCAAACTACGGCTGCAAATATTTTTTTCTATGATTGCAAAGACCTAGGGTTTGCACCCTACGGCGAAGAATGGAGACAGAAAAGAAAAATTTGTGTTCTCGAGCTTTTAAGTCTTAAAAGAGTTAAATCATTTCTTCCTGTAAGAGAACAAGAGGTTGAAGGACTTGTTGCTACCATTCGGAATGCAAGTTCAAGAGAAGGCTCATTGTCATCATCATCTTGTGTGATTAATCTTAGTGAGTTGATGATTGCTACATCAAACAACATAGTTTCAAGATGCGTTCTTGGAGAAAAGTATGATCTTCCGGACGATAGTGACCATGCAAGCTTTGGAGATCTTGGGAGGAAGTTGATGGGGAAACTCACTGAATTTTGTGTTGGTGATTTCTTCCCTTCATTGGGTTGGATTGATGTTGTTAGAGGTTTGATTTCTGAGTTTAATGCCACTTTTGTAGAATTAGATTCTTTCTTGAACCGGGTAATTGAAGAACACAAGAAAAAGAAAAAAAACACTAAAGATGATGATAATAGTAACAAAGACTTTGTGGATATTATTCTTCATCTTCAAGAGAAGGATATGCTGGACTTTGAGTTGACTCAAGCCGATCTCAAAGCAATTATAATGGACATGTTTGTTGGAGGGAGTGATACCACCTCAACCATATTAGAATGGACTTTTGCTGAACTTCTTAAGAAGCCAAGCACCATGAAGAAAGTTCAAGAAGAAATAAGGAGAATTGTGGGTAACAAATCAAAGGTAGATGAAAATGATATAAATCAAATGAACTATTTGAAGTGTGTGATCAAAGAATCTCTTAGGTTACATCCTCCTCTTCCTATCTTAGTTCCTAGACAAACAACATCACATTCAAAAATAAAAGGGTATGAGGTTCCTTTAAAAACAACTGTGTATTTGAATGTTTGGGCAATTCATAGGGACCCTGAATTATGGGATAATGCTGAAGAATTCATCCCTGAAAGATTTGAAATTAACCGAATTGATGAAAAAGGACAAGATTTTCAGTTATTGCCATTCGGTTCTGGAAGAAGGGGTTGTCCTGGAATTTCATTTGGACTTGCTTCTACTGAATTTATTCTTGCTAATCTTTTATATTGGTTTGATTGGAAGCTACCTTCTGAAAATGGTGATGAAGTAGTGCAAGATATTGACATGAGTGAAATGTCTGGAATTACTGTTGGTAAGAAAGATCCGCTTCTTCTTCAACCCATACCATATTCTCTTTGA 1587 0.3674 MALTISVLMQLPYEFNSTLYLSIVVAIISIILVGNYFTRRSEFINLPPSPPKLPFIGNLHQLGTLPHRSFKELSNKHGPLMFLQLGQIPTLVVSSANMAKEIIKNHDIVFSSRPQTTAANIFFYDCKDLGFAPYGEEWRQKRKICVLELLSLKRVKSFLPVREQEVEGLVATIRNASSREGSLSSSSCVINLSELMIATSNNIVSRCVLGEKYDLPDDSDHASFGDLGRKLMGKLTEFCVGDFFPSLGWIDVVRGLISEFNATFVELDSFLNRVIEEHKKKKKNTKDDDNSNKDFVDIILHLQEKDMLDFELTQADLKAIIMDMFVGGSDTTSTILEWTFAELLKKPSTMKKVQEEIRRIVGNKSKVDENDINQMNYLKCVIKESLRLHPPLPILVPRQTTSHSKIKGYEVPLKTTVYLNVWAIHRDPELWDNAEEFIPERFEINRIDEKGQDFQLLPFGSGRRGCPGISFGLASTEFILANLLYWFDWKLPSENGDEVVQDIDMSEMSGITVGKKDPLLLQPIPYSL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc76g00019 528 Gene3D Cytochrome P450 34 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PANTHER CYTOCHROME P450 71B11-RELATED 32 524 - -
Stsc76g00019 528 FunFam Cytochrome P450 83B1 36 522 - -
Stsc76g00019 528 Pfam Cytochrome P450 47 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 SUPERFAMILY Cytochrome P450 47 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 CDD CYP71-like 76 519 - -
Stsc76g00019 528 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00019 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc76g00019 Stsc-Chr76 112964 115724 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc76g00019 45 519 Cytochrome P450 AT3G48310 43.816 5.32e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc76g00019 K20617 - gmx:100792382 629.402