Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc76g00018 ATGGTAACAATCTTAGATACTCATACAGTGATTCCAAGAGAAGAAACTCCAAAGGGTCTTGTACACTTATCAGACAACGACCAACTTTGGCGATGGAGTCACACACCTTCAATCTATGTCTACAAACCAACACAAAATAGCAACAACAACAACCTCATTGAGAGAATGAGAGATTCCCTTAGCGAGATTCTGATTCATTACTATCCCTTAGCTGGGAGGTTGAATTGGACGAAAGGTAGCCGTTTAGAACTCGATTGCAACTCAAAGGGAGTGTTGCTTCTAGAAGCCGAATCTTCGAAATCAATGGCCGAATACGGTGGCTTCTTGCCTAACAATCCAAGCGTTAAAGAACTCGTCCCAACCGTTGATTACTCTCGTCCTATCAACGAGCTTCCATTGTTCTTAGCACAGGTGACAAAGTTTAAAGGAAGCAATGATGGCGGCGGCTTTGTTATTGGAACGGCCTTATCTCATCCTCTAGCAGATGGAATCTCAGCGATTCGCTTCATCAACGCATGGGCAAAGCTCACTCGAGGTGCCACATTGGATCCGGCAAATGACCTTCCTTTTCTTGATCGAACCATTCTCAAACCATCTCATCCAGTGAACCCGCCGCGGTTTGACCACCCGGAGTTTAAGCCTCTGCCTCTCATCCTCGGAAGAACCGATAATCTGGAAGAGCAAAAGAAGAAGACGACCTTCGCGCGTCTCGATCTCAATCCAGAACACGTCCAAAAATTAAAGAAGAATGCAAACAAAAATGCAATAGCAAACAGCGTTGATGATAATCAAAACGGATCTGAAAGACCGTACAGCAGATTTGAAGTTATCTGCGCGCATATATGGAGATCTGCTTGCAAAGCTCGGAAGCTTCAAGAAAATCAACCAACTGTTGTGAAATTCAACGGTGACATTCGAAGTCGGTTACAACCGCCACTTCCTCATAACTACTTCGGAAATGCTTTGTCTCCAACGGTTACTCCAGTTTGTTACGTTAAAGAAATCACCACTCGACCGTTGAGTTTCGTGGCGGAAATGATCAGAGAAGCGGTTAAGAAATTTTCAAATCCTGAGTATGTGAAATCACAAATGGATTATGTAGCAGGGTTTGAAGGACGTTGGGATCTGATTAGAACACCGCATTCGGAGAAAGGCGAGTATAGAACAGATATTCCTTTCTTTGGGAACCCTAACATTATACTTGGAAGTTGGATGAGTTTGCCTGTGTATGAAGCTGATTTTGGGTCTGGGAAGCCTTTTTATTTTGGTCATGGGGGTTTGTGCCCTTATGATAGAGGGATTATTGCTCTGGCTCCTGATGATGGTGATAATGGTGGTGGGGTTGTTGTTTTCATGAATTTTCAGGAGGAACACATGAAAGATTTCATCAAGTTCTTTTGGGAAGATATATGA 1413 0.4345 MVTILDTHTVIPREETPKGLVHLSDNDQLWRWSHTPSIYVYKPTQNSNNNNLIERMRDSLSEILIHYYPLAGRLNWTKGSRLELDCNSKGVLLLEAESSKSMAEYGGFLPNNPSVKELVPTVDYSRPINELPLFLAQVTKFKGSNDGGGFVIGTALSHPLADGISAIRFINAWAKLTRGATLDPANDLPFLDRTILKPSHPVNPPRFDHPEFKPLPLILGRTDNLEEQKKKTTFARLDLNPEHVQKLKKNANKNAIANSVDDNQNGSERPYSRFEVICAHIWRSACKARKLQENQPTVVKFNGDIRSRLQPPLPHNYFGNALSPTVTPVCYVKEITTRPLSFVAEMIREAVKKFSNPEYVKSQMDYVAGFEGRWDLIRTPHSEKGEYRTDIPFFGNPNIILGSWMSLPVYEADFGSGKPFYFGHGGLCPYDRGIIALAPDDGDNGGGVVVFMNFQEEHMKDFIKFFWEDI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc76g00018 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 462 - -
Stsc76g00018 470 Gene3D - 221 468 IPR023213 -
Stsc76g00018 470 Gene3D - 1 214 IPR023213 -
Stsc76g00018 470 Pfam Transferase family 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc76g00018 Stsc-Chr76 87290 90663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc76g00018 2 468 Monolignol Biosynthesis Gene Families AT5G48930 34.261 2.30e-80 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc76g00018 K13065 - gmx:100779814 484.952