Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc76g00017 ATGGCACTTGTGTCAATTCTAAAGCAATTGGCATATGAAGAAAACTCAACTCTTTACAATTCGATATTATTTGGAATCATTATCACCATCTTATTGGTTGTTCATAATCTCATCATCACAAGAAAAAGAAACAATAATAACCTTCCTCCATGCCCACTACAGCTACCCTTCATTGGAAACCTTCATCAATTAGGAGCACTTCCTCACCGTTCCTTCCATGAGCTCTCAAAGAAGCATGGCCCTCTAATGTTGTTGAAGTTGGGACAAGCCCAGCCTACGGCTGCGAATATCTTTGTCTATGGATGCAAGGACATAGGTTTTGCACCGTATGGTGAAGAATGGAGACAGAAAAGAAGGATTTGTGTTCTCGAACTTTTAAGTGTTAAAAGGGTTCGCTCATTCCAATCTGTTCGCCAACAAGAGATTGCAGAATTGGTGGGTAGTATACGAGAAGCATGTGAAAGAAACAAAGGATGTTGTGTGAATCTTAGTGAGTTGCTAATTTCAACATCAAACAACATAGTATCAAGATGTATTCTTGGACAAAAGTATGATAATCCAAAAGATGGTAGCGGCAAAAATTTCGGGGAGCTTGGAAGAAAATTGATGAGACAATTTGCTTCTTTCAGTGTGAAAGATTTCTTCCCTTCATTGGGTTGGGTTGATGTTGTTACAGGTTTGATATCAGAAATGAATGCGATTTTCGTAGCATTTGATTCTTTCTTAGAAGATGTGATTGAAGAGCATAGAAGAAGGATTAAAATGAAGGAGGAAAAAGAGGACAAAGACTTTGTTGATATACTTCTTGAACTTCAAGAGAATAATATGCTTGAGTTTGAGGACACTCAAGATAGCTTGAAAGCAATCCTAGTGGACATGTTTGTTGGAGGAAGTGATACAACCTCAACAACTTTAGAATGGACTTTTGCTGAGCTCCTCAAGAATCCAAAAGCGATGAAGAAAGCCCAAGAAGAGGTAAGGAGAGTTGTGGGGAGAAAATCAAAGGTGGAAGAAAATGATGTGAATCAAATGAACTATTTGAATTGCGTGATCAAAGAAACTCTAAGATTGCATCCACCTGTTCCTCTCTTAATCCCTCGACAAACAACATCGAGCGCGAAAGTGAAAGGTTTCGATATTCCTCCGAAAACTAGAGTGTTTATAAATGCATGGGCGATTCAAAGGGACCCCGAATTATGGGAGGATCCCGAAGAGTTCATTCCGGAAAGATTTGAAAACAACCAAGTTGATGTAAGAGGATTAGATTTCAAATTAATACCATTTGGTATTGGAAGAAGAGGTTGTCCTGGAATTTCGTTTGGACTTGTTTCTACTGAATATGTTCTTGCTAATCTTCTATATTGGTTTGATTGGAAGCTGAATGGTGAAGATGCATGTGACATAGACATGAATGAAATGTGTGGACTCACTGTTAGTAAGAAAGTACCACTTCATCTTCAACCCATATCATACTCTCTTTGA 1482 0.3839 MALVSILKQLAYEENSTLYNSILFGIIITILLVVHNLIITRKRNNNNLPPCPLQLPFIGNLHQLGALPHRSFHELSKKHGPLMLLKLGQAQPTAANIFVYGCKDIGFAPYGEEWRQKRRICVLELLSVKRVRSFQSVRQQEIAELVGSIREACERNKGCCVNLSELLISTSNNIVSRCILGQKYDNPKDGSGKNFGELGRKLMRQFASFSVKDFFPSLGWVDVVTGLISEMNAIFVAFDSFLEDVIEEHRRRIKMKEEKEDKDFVDILLELQENNMLEFEDTQDSLKAILVDMFVGGSDTTSTTLEWTFAELLKNPKAMKKAQEEVRRVVGRKSKVEENDVNQMNYLNCVIKETLRLHPPVPLLIPRQTTSSAKVKGFDIPPKTRVFINAWAIQRDPELWEDPEEFIPERFENNQVDVRGLDFKLIPFGIGRRGCPGISFGLVSTEYVLANLLYWFDWKLNGEDACDIDMNEMCGLTVSKKVPLHLQPISYSL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc76g00017 493 SUPERFAMILY Cytochrome P450 49 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Stsc76g00017 493 CDD CYP71-like 78 484 - -
Stsc76g00017 493 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 FunFam Cytochrome P450 83B1 89 487 - -
Stsc76g00017 493 PANTHER CYTOCHROME P450 71B11-RELATED 33 489 - -
Stsc76g00017 493 Coils Coil 319 339 - -
Stsc76g00017 493 Gene3D Cytochrome P450 34 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 Pfam Cytochrome P450 105 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS E-class P450 group I signature 21 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00017 493 PRINTS E-class P450 group I signature 170 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc76g00017 Stsc-Chr76 76880 79831 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc76g00017 27 489 Cytochrome P450 AT5G25120 40.524 1.23e-126 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc76g00017 K20617 - gmx:100792382 605.134