Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc76g00014 ATGGCACCTTCATTATCAATACTAAATCACTTGTCATATGTGAAGTCCTCATCAACTCTTTACCTTTTGTCAATAATAATTGGCATCATTACCATCTTTCTTATGCTTAAACTCACAAGAACAAGAAGAAACAAAGCCAATAATAATCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAAGTAGGAACATTGCCACATCACTCCTTCTATGAGCTCTCAAAGAAGCATGGCTCTCTCATGTTCCTTCAATTAGGGCAAATCCCAACCCTAGTGATTTCCTCGGCCGACATGGCCAAAGAAATCACAAAAAACCATGACATCGTTTTCTCAAGTAGGCCGTCGGTCACAGCAGCAAAAATCTTTGTACATGGAGGCAAAGACGTGGCGTTTTCGCCCTACGGCGAAGAATGGAGACAAAAAAGAAAGTTGTGTGTTCTTGAGCTTCTGAGTCTCAAGAGGGTGAGATCATTTCAGTCCATCAGAGAAGAAGAGGTTGTCGAACTGGTCGATTCTATTCGCAGATCTTGCGCTACAAGCAAAGAAGGGAGTGTGATCAATCTTAGTGAGATGATGATTGCAACATCAAACAATATAGTATCAAGTTGTGTTCTTGGACAAAAGTATGATACCCCAAAAGATGGAAGAAGCAATAGCTTTGGAGATCTTGGAAGGAAATTGATGAAACATTTCTCTGACTTTTGTGTTGGTGATTTTTACCCTAAATTGGGTTGGGTTGATGTTCTTAGAGGGCTTGTTCCTGAATTCAAGACCACCTTTGCTGGATTAGATGCATGCTTTGATGAGGTGATTGAAGAACATAAGAGGATGAAGAAAAATGGTGGTGGTGATGATGAAGAACTATTATCTATTAGAAAAGATTTTGTTGAGATATTGCTTCAACTTCAAGAGAATGGTGTGCTTGATTTTCAACTCACTGGAGAAGACATCAAAGCAATTCTAGCGGACATGTTTGTTGGAGGAAGTGATACTACTTCAACAACTCTAGAATGGACTTTTGCTGAGCTCCTCAGGAACCCAAATGTCATGAAGAAAGCTCAAGAAGAGGTAAGAAGAGTTGTGGGGAGCAAATCAAAAGTGGAAGAAAATGATGTGAATCAAATGACCTATTTGCAATTTGTGATCAAAGAAAGTCTCAGACTACATCCACCTCTCCCTCTTTTAGTTCCTAGAGAAACATTATCCGGTGTGAAAGTAAAAGGGTATGATATTCCTCCAAAAACAAGGGTATTTTTTAATGTATGGGGAATTCAAAGGGACCCTGAATTATGGGAAAATCCAGAAGAATTTCTTCCTGAGAGATTTGAAAACAACTCAGTTGATTTCAAAGGACATGATTTCCAATTACTCCCATTTGGTACTGGAAGAAGGGGCTGTCCTGGAATTTCATTTGGACTTACTTCTGCTGAATATATTCTTGCTAATCTTCTATATTGGTTTGATTGGATGCTATGTGATGAGAATGGTGAAGTATTACATGACATAGACATGAGTGAAATGTGTGGGCTCACTGTCACTAAAAAAGTACCACTTCATCTAACACCCATACCATACTTCTCTTGTATTAGAAATTAG 1608 0.3887 MAPSLSILNHLSYVKSSSTLYLLSIIIGIITIFLMLKLTRTRRNKANNNLPPSPPKLPLIGNLHQVGTLPHHSFYELSKKHGSLMFLQLGQIPTLVISSADMAKEITKNHDIVFSSRPSVTAAKIFVHGGKDVAFSPYGEEWRQKRKLCVLELLSLKRVRSFQSIREEEVVELVDSIRRSCATSKEGSVINLSEMMIATSNNIVSSCVLGQKYDTPKDGRSNSFGDLGRKLMKHFSDFCVGDFYPKLGWVDVLRGLVPEFKTTFAGLDACFDEVIEEHKRMKKNGGGDDEELLSIRKDFVEILLQLQENGVLDFQLTGEDIKAILADMFVGGSDTTSTTLEWTFAELLRNPNVMKKAQEEVRRVVGSKSKVEENDVNQMTYLQFVIKESLRLHPPLPLLVPRETLSGVKVKGYDIPPKTRVFFNVWGIQRDPELWENPEEFLPERFENNSVDFKGHDFQLLPFGTGRRGCPGISFGLTSAEYILANLLYWFDWMLCDENGEVLHDIDMSEMCGLTVTKKVPLHLTPIPYFSCIRN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc76g00014 535 CDD CYP71-like 80 522 - -
Stsc76g00014 535 PANTHER CYTOCHROME P450 71B11-RELATED 35 527 - -
Stsc76g00014 535 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 SUPERFAMILY Cytochrome P450 51 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 FunFam Cytochrome P450 83B1 37 525 - -
Stsc76g00014 535 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 Coils Coil 354 374 - -
Stsc76g00014 535 Gene3D Cytochrome P450 35 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 Pfam Cytochrome P450 51 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc76g00014 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc76g00014 Stsc-Chr76 65488 68427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc76g00014 51 531 Cytochrome P450 AT3G26330 43.802 3.12e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc76g00014 K20617 - gmx:100792382 623.624