Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc76g00007 ATGACAAGCAATGGTGATGATGAAGCTGGGTTAGAATTAATGGAGCAGTTTCTTTGTGAGGCCGAGGAGGAGTATATTCCGAAGGTTGGAATGACGTTTCAGACACTTGAGGAAGCTGGGTTGTTTTATAAAGAGTATGCCAAACGTGGAGGATTCTCAACGAAAATAAGGAACACAAATAGAAGTAAGTGTACTAAGGAAGTTATTAATCAACTCATAACATGCAACAGAGAAGGGAGATGGATATCCAAAGTACCACGTGCTGAGAAGACGAACCCTATTTGTGGAGCTAAATGTCCAGCTCAAATATTCGTTTATCTAGAAAAGAAGACAAGGCGGTGGCTTATTTCAAAGTTGTTCTTGGCCATTCACACCCTTGATTTTCTGATCAGTGTCAAATGCTGGCACAACACAGGGAGTTAA 423 0.409 MTSNGDDEAGLELMEQFLCEAEEEYIPKVGMTFQTLEEAGLFYKEYAKRGGFSTKIRNTNRSKCTKEVINQLITCNREGRWISKVPRAEKTNPICGAKCPAQIFVYLEKKTRRWLISKLFLAIHTLDFLISVKCWHNTGS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc76g00007 140 Pfam FAR1 DNA-binding domain 42 119 IPR004330 -
Stsc76g00007 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc76g00007 Stsc-Chr76 38220 38751 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc76g00007 FAR1 2.4e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc76g00007 - - adu:110280446 120.168