Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc76g00005 ATGCCGCAGGATTCCTCCGATCAAGACCTCGACGACGTCGATTCCGAGTTCGTCGAGGTTGACCCTACTGGTCGCTATGGTCGGTACAAGGAAGTTTTAGGGAAGGGAGCTTTCAAGAAAGTATATCGAGCATTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAAGGTGGCGGATCTGCTGCGTAACTCGGAGGATTTGGAGAGACTTTATTCCGAGGTTCATCTGCTCAAGACATTGAAACACAAGAATATAATTAAGTTCTACAACTCGTGGGTTGACACCAAGAATGAGAACATCAACTTCATTACCGAGATTTTCACCTCGGGAACATTACGCCAATATCGGAAGAAACATAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGCCTTTTATATCTTCACAGTCATAATCCCCCAGTTATACATCGAGACCTTAAGTGTGACAACATTTTTGTCAACGGGAATCAAGGGGAGGTAAAAATTGGAGATTTAGGGTTGGCAGCTATTCTTCAACAGGCCCAAGCAGCCCACAGTGTCATAGGTACCCCAGAGTTCATGGCCCCAGAACTTTATGAAGAAGAGTACAATGAGCTTGTTGATATCTATGCTTTTGGAATGTGCTTGCTAGAGTTGGTAACCTTTGAGTACCCATATGTTGAATGTTCCAATGCTGCTCAAATATACAAGAAAGTGACATCGGGAATAAAGCCAGCATCATTGGCAAAAGTGGCAGATCCAGAAGTTAAGGCATTCATTGAGAAGTGTATCGCTAATGTTTCAGAACGGTTGCCTGCAAAGGATCTCTTGATGGATCCCTTCCTTCATTCAGACTCTGATAGTGAAAGTGTAGGTCGTTCTTCAAGGTCTGGAACACATCATTCAGGAAATAGTTCTAATAATCAAGCAATTGGAAAAGGTGTTCAGGATGTTCCTGGTGATTCAAATAGGGAATTCACAGTGGAAGGCCAGAGGAAAGATGTTGATACAATATTTTTAAAACTGCGAATAGCGGACTCCTCAGGTTCTCCCTCTATTTTAATGTCATGTTCGGAATATCCATTTCCCTTTCGATATTGGAGCGGACACTGCAATCTCTGTTGCTAG 1137 0.4274 MPQDSSDQDLDDVDSEFVEVDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQAQAAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECSNAAQIYKKVTSGIKPASLAKVADPEVKAFIEKCIANVSERLPAKDLLMDPFLHSDSDSESVGRSSRSGTHHSGNSSNNQAIGKGVQDVPGDSNREFTVEGQRKDVDTIFLKLRIADSSGSPSILMSCSEYPFPFRYWSGHCNLCC 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc76g00005 378 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Stsc76g00005 378 MobiDBLite consensus disorder prediction 290 316 - -
Stsc76g00005 378 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc76g00005 378 MobiDBLite consensus disorder prediction 290 331 - -
Stsc76g00005 378 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Stsc76g00005 378 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Stsc76g00005 378 SUPERFAMILY Protein kinase-like (PK-like) 29 293 IPR011009 -
Stsc76g00005 378 CDD STKc_WNK 25 285 - -
Stsc76g00005 378 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc76g00005 378 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Stsc76g00005 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Stsc76g00005 378 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 352 - -
Stsc76g00005 378 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc76g00005 Stsc-Chr76 22669 26206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc76g00005 15 352 MAP Kinase Kinase Kinase AT3G22420 53.728 4.21e-144 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc76g00005 Pkinase 7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc76g00005 K08867 - zju:107418314 578.17