Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc761g00004 ATGGACCTTCAAACCTTAGAAGATTTGAACATGGTCACACAAAAACCTTCTATGCATGAAAATAACGAGAATCAAGAACTAGAAGAGTCTATTCAACTTGATCTAAGTCTTTCAAGCAATGATGATTCTTCAAAAACAAAGCATAAGCAAGAACTGAACTTGCTCAACTTTCTTGATCCAAACTCACCTGAAAACTCATCAGATTCAACCCATAACAAGAACAAGAACAATGAAATGGAGCACAGAACATTCTCATGCAACTATTGCCAGAGAAAGTTCTACAGTTCTCAAGCACTTGGTGGCCATCAAAATGCACACAAACGTGAAAGAACATTAGCAAGAAGAGGACATCATCATCACCATAAATCTCCATTGTTATCATCATCAATGGTAGATTTTGGATACAGATTCTCTTCTTCTAATTCTGCTTCTTCTTCTTCAAATGGATCCTATAACAAGCCTCTTGGGATTCAGGCTCATTCTATGATCAATAAACCTTCTTATCATCAGCCACCCTTTTTCGCAGCCACGTGTCGCGAAAATGGGTGGCAGAGGCAGCATTATTTGGATTCACAGCCTGCAATTGGGAAGCTCAATAATCATAATGGCATGGAATCTGAATCATCATCATCCGTGGCTGCTATCGGCGGCGGCGGCGGCGGTGGCGTGCCGAGGTTAGGGAAGTTTCTTCCTGCAAGGCTTGTGACACAAGGTTTTGGAGGGTATTGGTTTGGTAGTTCTTCTTCTCATTTGAATTCTTCTAAACATGACAATAATAAGTTGCAGAAGCTTGATTTGTCACTCAAGCTCTAA 813 0.4059 MDLQTLEDLNMVTQKPSMHENNENQELEESIQLDLSLSSNDDSSKTKHKQELNLLNFLDPNSPENSSDSTHNKNKNNEMEHRTFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGHHHHHKSPLLSSSMVDFGYRFSSSNSASSSSNGSYNKPLGIQAHSMINKPSYHQPPFFAATCRENGWQRQHYLDSQPAIGKLNNHNGMESESSSSVAAIGGGGGGGVPRLGKFLPARLVTQGFGGYWFGSSSSHLNSSKHDNNKLQKLDLSLKL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc761g00004 270 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Stsc761g00004 270 MobiDBLite consensus disorder prediction 55 70 - -
Stsc761g00004 270 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Stsc761g00004 270 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Stsc761g00004 270 MobiDBLite consensus disorder prediction 1 20 - -
Stsc761g00004 270 MobiDBLite consensus disorder prediction 98 125 - -
Stsc761g00004 270 Gene3D Classic Zinc Finger 61 142 - -
Stsc761g00004 270 MobiDBLite consensus disorder prediction 108 124 - -
Stsc761g00004 270 MobiDBLite consensus disorder prediction 55 78 - -
Stsc761g00004 270 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 270 IPR044246 GO:0009788
Stsc761g00004 270 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc761g00004 Stsc-Chr761 26820 27647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc761g00004 5 270 C2H2 Transcription Factor Family AT5G10970 35.766 4.53e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc761g00004 - - adu:107463735 327.791