Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc75g00004 ATGGCTTCACACAAAATTAACAATGGTGTCAAAGCAAATGAGATCTTTGAAGGTCAAGTTAAGTTGTACAAACACATGTTTGCATTCTTAGACTCTCTTTGCCTTAAGTGGTGTGTTGACATGAACATACCAAACATAATCCACAACCATGGTCAACCTATGACTCTTCATGAGTTGGTGTCAACTTTGAAAGTTCCACTGGCTAAGGTTAGTGGTGTGCACCGTTTAATGCGTTATCTTGCACACCTTGGATTCTTTGATATAGTAAGAATTATCCAAGAAGATCAAGAAGAAAAGGAAGAAGCATATGTTCTCACTTATGTCTCAAAGCTCCTTGTTAGAGGCACTGATCATTGTTTATCTCCAATGGTTGACCTTATTCTTGACCCAACTGTCTCAACTTCGTACCAACAACTTGGGAAGTGGATTCATGATGAGGGAAATCAAACACCATTTGCTATGGCATTGGATACAGATATCTGGGACTTTCTTAGCAATAACCCTACACATATGAAATACTTCAATGATGCAACTGCTAGTGACTCTCAAATCATAAACTTGGCATTGAGAGATCATGGTGTTGTCTTTGAAGGGTTGGAATCAATTGTAGATGTTGCTGGAGGAACTGGAATGGTAGCCAAGTATCTTTCTGAGACATTTCCACATTTGAAATGCATTGTTTTTGACCTGCCACAAGTTGTGAAAAATCTTAAAGAAAGCAACAATTTGAGTTATGTTGGTGGGAATATGTTTCATTCTATCCCTAAGGCTGATGCAGTTCTACTCAAGGTATGTGTGTTTCATCAAATCTAA 813 0.3813 MASHKINNGVKANEIFEGQVKLYKHMFAFLDSLCLKWCVDMNIPNIIHNHGQPMTLHELVSTLKVPLAKVSGVHRLMRYLAHLGFFDIVRIIQEDQEEKEEAYVLTYVSKLLVRGTDHCLSPMVDLILDPTVSTSYQQLGKWIHDEGNQTPFAMALDTDIWDFLSNNPTHMKYFNDATASDSQIINLALRDHGVVFEGLESIVDVAGGTGMVAKYLSETFPHLKCIVFDLPQVVKNLKESNNLSYVGGNMFHSIPKADAVLLKVCVFHQI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc75g00004 270 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 268 IPR029063 -
Stsc75g00004 270 Gene3D Vaccinia Virus protein VP39 114 269 IPR029063 -
Stsc75g00004 270 Pfam O-methyltransferase domain 136 267 IPR001077 GO:0008171
Stsc75g00004 270 SUPERFAMILY "Winged helix" DNA-binding domain 13 115 IPR036390 -
Stsc75g00004 270 Gene3D - 4 112 IPR036388 -
Stsc75g00004 270 FunFam Coniferyl alcohol 9-O-methyltransferase 5 112 - -
Stsc75g00004 270 Pfam Dimerisation domain 34 81 IPR012967 GO:0046983
Stsc75g00004 270 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 270 IPR016461 GO:0008168
Stsc75g00004 270 PANTHER O-METHYLTRANSFERASE 22 268 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc75g00004 Stsc-Chr75 37778 38992 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc75g00004 33 265 Monolignol Biosynthesis Gene Families AT5G54160 30.672 4.23e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc75g00004 K22588 K13262 ag:AAC49926 312.383