Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc758g00002 ATGAAGAGGGTGTTGTTGCTTCTTTTGTTTGTTGCTTTTGGTTCTCTTGTTATGGTTCCTGAGGCTTCTGCTAAGAGATGGCTTGTTGGTGATAACATGGGTTGGTCTACTAGCTATGGTGTAAACTACACTAATTGGGCCAAGGGAAAGCATTTCTACTATGGTGATTGGCTATTCTTTGTGTATGATAGAAACCAAATGAATGTTTTAGAGGTGAACAAGACAGACTATGAAAGCTGTAATTCTGATCACCCTCTTCACAACTGGACCACCGGGGCTGGAAGAGACGTGGTTCCATTAAACGTGACGCGAAACTACTACTTCATCAGTGGCAAGGGATTCTGCTTTGGTGGCATGAAGCTAGCTGTCCATGTCGAGAAGCAGCCGCCACCGCCGAAGGCAGCCCCTGAAGTAGCTGGAGCACCACTGGCATTGTACTCAAGAAGCCAGGTTGTTTTATTGCCAGTTGTCTTGGCCGTTGGGGCAGCATGGGATGCATTCATTCATCTTTTGTAG 516 0.4632 MKRVLLLLLFVAFGSLVMVPEASAKRWLVGDNMGWSTSYGVNYTNWAKGKHFYYGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCFGGMKLAVHVEKQPPPPKAAPEVAGAPLALYSRSQVVLLPVVLAVGAAWDAFIHLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc758g00002 171 Gene3D - 23 129 IPR008972 -
Stsc758g00002 171 PANTHER BLUE COPPER PROTEIN 26 132 IPR039391 GO:0009055
Stsc758g00002 171 ProSiteProfiles Phytocyanin domain profile. 25 127 IPR003245 GO:0009055
Stsc758g00002 171 FunFam Lamin-like protein 23 128 - -
Stsc758g00002 171 Pfam Plastocyanin-like domain 35 119 IPR003245 GO:0009055
Stsc758g00002 171 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc758g00002 Stsc-Chr758 19911 22178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc758g00002 4 170 Phytocyanin Superfamily AT5G15350 51.190 1.63e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc758g00002 - - mtr:11412511 251.136