Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc751g00002 ATGCTTGATACCCAAGGCTACCTTGTGTTGTTTCTTCTATGGTTCATCTCCATCATTTTAATCAAATCTTTCGTCACAAGGTCCCAAAGCCTTAAACTCCCCCCAGGTCCCCCAATTTCCTTGCCACTTCTGGGTCACGTACCTTACCTCGGATCCCTCCTTCACCAAGCCTTATACAAGCTATCACTGCGCTATGGACCCCTTATTCACATTCTCATTGGTTCCAAGCACGTTGTGGTTGTTTCCTCAGCAGAAATGGCGAAGCAGATTCTTAAGACTAATGAGGAATCCTTCTGCAACCGTCCGACCATGATAGCCAGCGAGAGTTTGACGTATGGCGCCGCAGACTACTTCTTCGTTCCGTACGGAACATACTGGAGGTTCCTTAAGAAGCTCTGCATGACGGAGCTTCTTAGCGGGAAAACCCTAGAACACTTCGTCGGCATTCGCGAGGACGAAGTGGAGGCGTTTCTAAGGAACATTCTAGAAATATCAACGACTGGAAAGGCGATCCAGATGAGGCAGGAGTTTATGAGGCATACGAACAACATAATCTCGAGGATGACGATGGGGAAGAAGAGCCTCAAGAACGACGACGAGGTTGCGACGGTGAGGAAGTTGATTAGGGAAGTTGGGGAGCTTTTTGGGGCGTTTAATTTGGGGGATATAATTGGGTTCATGAGGCCTCTTGATGTTCAAGGGTATGGGAAGAAGAACCGGGAAACACATCACAAATTGGATGTGATGATGGAGAAGTTTTTTAAGGAGCATGAAGATGCAAGGTCAAAGTCTGGTGATAGCGAAAGGAAGAAGGATCTCTTTGACATTCTCTTGAACCTAATTGAAGCTGACGGCGATAATAAACTCACCAGAGAAAGTGCCAAAGCCTTTGCCCTGGACATGTTCATCGCCGGGACTAATGCGCCAGCAAGTGCGATAGAATGGTCATTAGCAGAGCTCATAAGGAACCCACACGCATTAAAGAAAACAAGAGAGGAAATCGATTTTGTAGTTGGCAAGGACAGACTGGTGAAAGAATCAGACATACCAAATCTTCATTATCTCCAAGCAGTAGTCAAAGAAACTCTGAGGCTTCACCCAACAGGACCAATCTTTGCAAGAGAAGCCATAAGAAGCTGCCAAGTCGAAGGCTATGACATTCCTCAGTACTCCAAAATCTTGATCAATGCTTGGGCCATCGGAAGGGATCCGAACCACTGGGACAACGCCCTCGAGTTCCGCCCGGAGAGGTTCTTGGAAACAGAGGAAGAACATGAGAAGAGTAAAATCGATCTGAGGGGACAATACTATCAGTTATTGCCATTTGGAAGTGGAAGAAGAAGCTGCCCTGGCTCTTCGCTCGCGTTGCTTGTTATCCAAGGAATGCTGGCGAGTTTGATTCAGTGCTTTGATTGGGTTGTTAATGATGGGAAGAATAATGAGGTTGATATGTCTGAGGAAGGAAGGGTAACTTTGTTTATGGCAAAACCCTTAAAGTGCAAGCCTGTTACTCGCTTTGTTCCATTCTCATCAGTATGA 1539 0.4633 MLDTQGYLVLFLLWFISIILIKSFVTRSQSLKLPPGPPISLPLLGHVPYLGSLLHQALYKLSLRYGPLIHILIGSKHVVVVSSAEMAKQILKTNEESFCNRPTMIASESLTYGAADYFFVPYGTYWRFLKKLCMTELLSGKTLEHFVGIREDEVEAFLRNILEISTTGKAIQMRQEFMRHTNNIISRMTMGKKSLKNDDEVATVRKLIREVGELFGAFNLGDIIGFMRPLDVQGYGKKNRETHHKLDVMMEKFFKEHEDARSKSGDSERKKDLFDILLNLIEADGDNKLTRESAKAFALDMFIAGTNAPASAIEWSLAELIRNPHALKKTREEIDFVVGKDRLVKESDIPNLHYLQAVVKETLRLHPTGPIFAREAIRSCQVEGYDIPQYSKILINAWAIGRDPNHWDNALEFRPERFLETEEEHEKSKIDLRGQYYQLLPFGSGRRSCPGSSLALLVIQGMLASLIQCFDWVVNDGKNNEVDMSEEGRVTLFMAKPLKCKPVTRFVPFSSV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc751g00002 512 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 Pfam Cytochrome P450 34 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 CDD CYP93 66 502 - -
Stsc751g00002 512 SUPERFAMILY Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Stsc751g00002 512 FunFam Cytochrome P450 family protein 25 500 - -
Stsc751g00002 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc751g00002 512 PANTHER CYTOCHROME P450 98A9 10 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc751g00002 Stsc-Chr751 21194 25275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc751g00002 1 505 Cytochrome P450 AT5G06900 42.240 9.07e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc751g00002 K24188 K15814 gmx:100037459 791.956