Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc750g00004 ATGGAAGCTCTTTTGTGCAGAAAACTGGGTGATCCATCGTTATCTTTGGAAGACGATAACTGCCCAATAATTGTGTCCAAGAACCATCCAATTCCTCAGTTGAAGTCTCCGACTTCTGTCAGAGTCAGAATCAAAGCAACGAGTTTAAATTTTGCAAATTACTTGCAGATCCAAGGTAAGTATCAAGAGAAAGCGGCTTTGCCATTCATACCTGGATCCGATTACTCGGGAATCGTTGACGCCGTTGGCCCCAAAGTTTCAAACTTTCGTGTTGGGGACCCTGTTTGTTCCTTCGCCGCTCTTGGTTCATTCGCCGAGTTCATTGTTGTTGAAGAGAACCAGTTGTTTCGTGTGCCAGAAGGTTGTGATCTTGTTGCTGCTGGAGCACTTGCTGTGGCATTTGGTACTTCTCATGTAGCACTTGTCCATAGAGCTAAATTGGCCTCTGGTCAGGTGTTGCTGGTTTTGGGTGCAGCAGGAGGTGTAGGGCTTGCAGCTGTTCAAATCGGAAAAGCATGTGGTGCCATTGTCATTGCTGTTGCTAGGGGAGCTGAAAAGGTGCAGATTTTAAAGTCTCTTGGTGTTGATCATGTGGTGGACTTGGGCAGTGAAAATGTTATTGAGAGTGTTAAAGAGTTCCTTAAGGCTAGAAGGCTTAAAGGCGTTGATGTCCTCTATGACCCGGTTGGAGGCAAGCTTACTAAAGAAAGTATGAAACTTCTGAAATGGGGAGCTCAGGTTCTCATAATTGGGTTTGCAAGTGGCGAAATTCCTGTCATCCCTGCTAACGTAGCTCTTGTTAAGAATTGGACAGTTCATGGTCTTTATTGGGGTAGCTACAAGATACATCGGCCGGCTGTTCTTGACGATTCTCTAAAGGAGCTATTGTCTTGGTTGGCAAGAGGGTTGATTTCCATCCACATTTCTCATTCCTACCGCATGTCAGAGGCCAATCTTGCGTTTTCTGCTATCAAAGATAGGAAAGTCATTGGGAAGGTGATGATTGTTTTTGATGATAAACTTGCAAGATCTAAGCTGTGA 1041 0.4476 MEALLCRKLGDPSLSLEDDNCPIIVSKNHPIPQLKSPTSVRVRIKATSLNFANYLQIQGKYQEKAALPFIPGSDYSGIVDAVGPKVSNFRVGDPVCSFAALGSFAEFIVVEENQLFRVPEGCDLVAAGALAVAFGTSHVALVHRAKLASGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGAEKVQILKSLGVDHVVDLGSENVIESVKEFLKARRLKGVDVLYDPVGGKLTKESMKLLKWGAQVLIIGFASGEIPVIPANVALVKNWTVHGLYWGSYKIHRPAVLDDSLKELLSWLARGLISIHISHSYRMSEANLAFSAIKDRKVIGKVMIVFDDKLARSKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc750g00004 346 Pfam Alcohol dehydrogenase GroES-like domain 38 97 IPR013154 -
Stsc750g00004 346 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Stsc750g00004 346 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 336 - -
Stsc750g00004 346 SMART PKS_ER_names_mod 10 335 IPR020843 GO:0016491
Stsc750g00004 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 288 IPR036291 -
Stsc750g00004 346 Gene3D - 34 331 - -
Stsc750g00004 346 Pfam Zinc-binding dehydrogenase 161 299 IPR013149 -
Stsc750g00004 346 SUPERFAMILY GroES-like 22 154 IPR011032 -
Stsc750g00004 346 CDD QOR1 1 335 - -
Stsc750g00004 346 Gene3D - 133 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc750g00004 Stsc-Chr750 4859 7525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc750g00004 65 266 Monolignol Biosynthesis Gene Families AT1G72680 28.452 6.26e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc750g00004 K00344 - gmx:100817700 571.622