Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc74g00019 ATGGCCATGCCATTGAGTTCAGAGACGGATAAGATTGCATTGCTTGCTTTGAAGGACAAGCTTACCAATGGCAACCCTCATGTTCTATCATCATGGAATCACTCTCTCCATTTCTGTAAATGGGAGGGCGTTACATGCAGTCGCCGCCGCAAGAGAGTCTCAGCCTTGCAACTTCAAAATCAATACTGGGGTGGCACTCTTGCGCCATCCTTGGGAAATCTAACGTTCCTAAGGGTGATCAATCTTACCAACATCAACTTGCATGGTGAGATTCCAAGAGAAGTCGGTCATTTAAAGAGGCTGCAGACTCTTGACTTGAGGCACAATAATCTTCACGGTCAGATTCCTATGGAGGTGACAAATTGTTCAAGTCTTGAGGTAATTATATTAGAACAAAATAATCTAACTGGCGAAATTCCTTCATGGCTTGGTTTTATGATGCAACTCAATCGACTAGTGCTTGGTGTCAACGGTTTTGTTGGTAGTATCCCAGCTTCTTTGGGAAATCTTTCATCGTTTGAGAAGTTGTCACTTGCAGAAAATCATTTGGAAGGAACCATAACTCCAGCTTTGGGTAGGTTGTCTAATTTGAAATCTTTGTCTTTGAGTTTAAATAATTTTTCAGGCCAAATCCCTCCTTCACTTTACAACCTTTCAAATATTCAAAAACTTTCAATCTCAGGAAACCAGTTAGTGGGTACTGTTCTCTCGAATATACCCATGGCTTTTCCTAATCTTGAGATATTTGCATGTGGAGGGAACCGATTCACCGGCGCTTTCCCATCTTCAATATCTAACCTTTCTGAACTGCAAAAGTTTGATATAGTTGAAAATGGTTTTCATGGATCAATTTCTCCTGCTCTTGGAAGTTTACACAAACTCCAAGAATTCAATGTCGGTGATAATAGATTTGGGAGCGGAAGAGCACATGATCTTGATTTCCTTTACTCGCTAACTAATTGTACTCAACTGCAATACCTTGTCTTTTATGAAAATAATTTAGGTGGTGCATTGTCAGATCTCATAGGTAACTTATCGAGAAATCTTGTTTTGCTTGATATGGGATTAAATCAAATATCTGGAAGGATACCTGAAAGAATTGGAAATCTATTTGGCTTAGATGAACTTCTTATGGATAATAATGCCTTTGAGGGACCAATTCCAAATTCAATTGGAAGGCTTCAAAATCTAGTACGAATAAACTTGGGTGGGAACTATCTCTCAGGTAATATTCCTACTGAAATAGGCAACCTTACTTTGTTGTCACAAGTTTCCATGGGCTTCAATTCATTTGAAGGAAGTCTTCCATTTACCTTGAGATATTGTACAGAGTTGCAGACATTCAGTATTCCAGCAAATAATTTGAGTGGAAACATACCTACTCAAGTCTTTGGCTATCAAGAAGGTTTAGTATATCTTGACTTATCTTCCAACTCCTTTTCTGGTTCAATCTCTCCAGAATTTGGTAATTTGAAGCATCTTTCCATATTATATCTATATGCAAACAAGTTTTCTGGTGTCATTCCTGTGGAACTTAGTGCGTGTTCTACATTAACAGAACTTCAACTAGAAAGAAACTTCCTCCATGGGATTCTACCCCCATTCTTGGGATCTCTAAAATCTCTTCAAATATTAGACCTTTCTAACAATAACTTCTCAGGAACAATACCCCATCAACTTGAAAACCTGACTTTTTTGAATTATTTGAACTTGTCCTATAACCATCTCTATGGTGAAGTCCCTCTAGGAGGAGTCTTTAGCAACATCACAGCAATCACACTCGTTGGAAATAAGGATCTCTGTGGTGGGATACCTCAACTGAATCTCCCTTCATGTCCAAAGTTGTCCTCAAACAAGCACAAGAGGTCTCATAAGAAGGAAATTATTCTCATTTCTGTGATTGGCGGGCTTTTGATCTCCTTTGTAATTTTTATTAGTCTCTATTGTTGTCTCATGAAAAAGCCCAAGAAGTTATCTTCTTCGCCATCACTAGAACATAGATACTTGAAGGTTTCCTATGGAGAGCTGCATCAAGCAACAAATGGGTTTTCTTCATCCAATCTAGTTGGCACAGGAAGCTTTGGCTCTGTGTATAGAGGAACCCTTGTCCATTTTGAGAGACCTGTTGCTGTCAAAGTGTTGAACCTTCAAACACGCGGGGCATCAAAGAGTTTCATAGCCGAATGCAAAGCTCTAGGAAAGATCAAGCATAGAAACCTTCTCAGCATATTGACTTGTTGCTCAAGTGTTGATTACAAAGGGAATGATTTCAAGGCCATAGTGTTCGAGTTCATGCGTAATGGGAGTCTAGAGACCTTGTTGCACAACACTATTGAAGATAGCGAATCCACAAATCCAAGTCTCAACCTTATTCAAAGAGTAAATATTGCTCTTGATATAGTTTTTGCATTGGATTATCTTCACAATGATTCAGGGGAAGCTGTAGTTCATTGTGATATTAAGCCAAGCAATATTCTATTTGATGATGACATGGCTGCCCACTTGGGAGACTTTGGATTAGCTAGACTCATTCATGGTGCTGCAAGCCATTCTAGTAGTGGTCAAGCTAGCTCCTCTACAATTAAGGGAACTATTGGATATATTCCACCAGAGTATGGAGCAGGTGGATCAATATCAGCAGAAGGAGACATGTATAGCTATG 2662 0.3926 MAMPLSSETDKIALLALKDKLTNGNPHVLSSWNHSLHFCKWEGVTCSRRRKRVSALQLQNQYWGGTLAPSLGNLTFLRVINLTNINLHGEIPREVGHLKRLQTLDLRHNNLHGQIPMEVTNCSSLEVIILEQNNLTGEIPSWLGFMMQLNRLVLGVNGFVGSIPASLGNLSSFEKLSLAENHLEGTITPALGRLSNLKSLSLSLNNFSGQIPPSLYNLSNIQKLSISGNQLVGTVLSNIPMAFPNLEIFACGGNRFTGAFPSSISNLSELQKFDIVENGFHGSISPALGSLHKLQEFNVGDNRFGSGRAHDLDFLYSLTNCTQLQYLVFYENNLGGALSDLIGNLSRNLVLLDMGLNQISGRIPERIGNLFGLDELLMDNNAFEGPIPNSIGRLQNLVRINLGGNYLSGNIPTEIGNLTLLSQVSMGFNSFEGSLPFTLRYCTELQTFSIPANNLSGNIPTQVFGYQEGLVYLDLSSNSFSGSISPEFGNLKHLSILYLYANKFSGVIPVELSACSTLTELQLERNFLHGILPPFLGSLKSLQILDLSNNNFSGTIPHQLENLTFLNYLNLSYNHLYGEVPLGGVFSNITAITLVGNKDLCGGIPQLNLPSCPKLSSNKHKRSHKKEIILISVIGGLLISFVIFISLYCCLMKKPKKLSSSPSLEHRYLKVSYGELHQATNGFSSSNLVGTGSFGSVYRGTLVHFERPVAVKVLNLQTRGASKSFIAECKALGKIKHRNLLSILTCCSSVDYKGNDFKAIVFEFMRNGSLETLLHNTIEDSESTNPSLNLIQRVNIALDIVFALDYLHNDSGEAVVHCDIKPSNILFDDDMAAHLGDFGLARLIHGAASHSSSGQASSSTIKGTIGYIPPEYGAGGSISAEGDMYSY 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc74g00019 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 47 311 - -
Stsc74g00019 887 SUPERFAMILY Protein kinase-like (PK-like) 656 887 IPR011009 -
Stsc74g00019 887 FunFam LRR receptor-like serine/threonine-protein kinase EFR 312 618 - -
Stsc74g00019 887 SUPERFAMILY L domain-like 319 602 - -
Stsc74g00019 887 Gene3D Ribonuclease Inhibitor 162 309 IPR032675 -
Stsc74g00019 887 Pfam Leucine rich repeat N-terminal domain 8 47 IPR013210 -
Stsc74g00019 887 SUPERFAMILY L domain-like 7 304 - -
Stsc74g00019 887 Gene3D Phosphorylase Kinase; domain 1 647 764 - -
Stsc74g00019 887 ProSiteProfiles Protein kinase domain profile. 683 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc74g00019 887 PANTHER OS04G0122200 PROTEIN 192 887 - -
Stsc74g00019 887 Gene3D Ribonuclease Inhibitor 310 621 IPR032675 -
Stsc74g00019 887 Gene3D Ribonuclease Inhibitor 6 161 IPR032675 -
Stsc74g00019 887 SMART LRR_sd22_2 98 127 - -
Stsc74g00019 887 SMART LRR_sd22_2 491 512 - -
Stsc74g00019 887 SMART LRR_sd22_2 539 565 - -
Stsc74g00019 887 SMART LRR_sd22_2 218 241 - -
Stsc74g00019 887 Pfam Protein kinase domain 685 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc74g00019 887 SMART LRR_typ_2 563 588 IPR003591 -
Stsc74g00019 887 SMART LRR_typ_2 98 122 IPR003591 -
Stsc74g00019 887 SMART LRR_typ_2 394 418 IPR003591 -
Stsc74g00019 887 SMART LRR_typ_2 539 562 IPR003591 -
Stsc74g00019 887 SMART LRR_typ_2 491 515 IPR003591 -
Stsc74g00019 887 SMART LRR_typ_2 194 218 IPR003591 -
Stsc74g00019 887 SMART serkin_6 683 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc74g00019 887 Gene3D Transferase(Phosphotransferase) domain 1 765 887 - -
Stsc74g00019 887 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Stsc74g00019 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Stsc74g00019 887 FunFam LRR receptor-like serine/threonine-protein kinase EFR 654 764 - -
Stsc74g00019 887 Pfam Leucine rich repeat 517 576 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc74g00019 Stsc-Chr74 136802 139572 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc74g00019 6 887 Receptor kinase-like Gene Family AT3G47570 45.506 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Stsc74g00019 Pkinase 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc74g00019 - - ahf:112766919 1265.37