Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc74g00006 ATGGGCGTCAACAGAGCTCCTTCGAAGTGCGCTTCCGTCGGTATCCAAGGTATCGCTTGGGCCTTCGGTGGCATGATCTTCGCCCTCGTTTACTGCACCGCCGGTATCTCAGGGGGTCATATAAACCCGGCCGTGACGTTTGGGTTGTTCTTGGCGAGGAAGTTGTCGGCGACAAGGGCGTTGTTCTACATAGTGATGCAGTGCCTGGGAGCTATCTGCGGTGCTGGTGTTGTGAAGGGATTTGAGGGGAAGAACTTGTACGGAACCCTTGGTGGTGGTGCCAACAAGGTGAACGATGGTTACACCAAGGGTGATGGTCTTGGTGCTGAGATCGTTGGTACCTTCATCCTTGTCTACACCGTCTTCTCCGCCACCGATGCTAAGCGTAACGCCAGAGATTCACACGTCCCTATTTTGGCACCGTTGCCAATTGGATTCGCTGTGTTCTTGGTGCACTTGGCTACCATCCCTATCACCGGAACTGGTATCAACCCTGCTCGCAGTCTCGGTGCTGCTATCATCTTCAACAAGCACGATGGCTGGCATGAGCACTGGGTGTTCTGGGTTGGACCATTCATTGGTGCAGCTCTCGCAGCTCTCTACCACGTGGTCGTGATCAGAGCCATTCCCTTCAAGAACAAGTGA 645 0.5411 MGVNRAPSKCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSATRALFYIVMQCLGAICGAGVVKGFEGKNLYGTLGGGANKVNDGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKHDGWHEHWVFWVGPFIGAALAALYHVVVIRAIPFKNK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc74g00006 214 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 210 IPR034294 -
Stsc74g00006 214 NCBIfam MIP family channel protein 10 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc74g00006 214 SUPERFAMILY Aquaporin-like 7 207 IPR023271 -
Stsc74g00006 214 FunFam Putative aquaporin PIP-type 7a 78 210 - -
Stsc74g00006 214 Pfam Major intrinsic protein 10 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc74g00006 214 ProSitePatterns MIP family signature. 40 48 IPR022357 -
Stsc74g00006 214 PRINTS Major intrinsic protein family signature 145 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc74g00006 214 PRINTS Major intrinsic protein family signature 109 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc74g00006 214 PRINTS Major intrinsic protein family signature 185 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc74g00006 214 PRINTS Major intrinsic protein family signature 22 46 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc74g00006 214 PRINTS Major intrinsic protein family signature 59 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc74g00006 214 Gene3D Glycerol uptake facilitator protein. 1 213 IPR023271 -
Stsc74g00006 214 CDD MIP 3 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc74g00006 Stsc-Chr74 37321 39414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc74g00006 1 214 Major Intrinsic Protein MIP AT3G61430 87.850 2.15e-134 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc74g00006 K09872 - rcu:8270440 392.889