Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc74g00005 ATGGAATCGAAAGGAGGGAGCAGTGGAGGAAGTGGAAGCAAGTGTGGGCGATGGAATCCAACGGCTGAACAAGTAGAAGTTCTGAGTTCACTGTTCAGGTCTGGTCTGCGAACACCAACCACTGATCAGATTCAGAGGATCTCCAATCACCTCAGCTTTTACGGCAACATTGAGAGCAAGAATGTCTTCTATTGGTTTCAGAACCATAAAGCTAGAGACAGACACAACAAGCGCCGCAAGCTCTCTACTGCTTCCTTTCATCATCACCATCATCATCGTACTAATAATAAGGATCTCAATGTTCTTCACTCTCAAAGTTTAGCTGAGATGTATCAAGTTTCAGAGCCTGACAATAATAATAATAGGGTGATTGAGACTCTTGAGCTCTTCCCCATGAACTCCTTTGGTGAATCCGAATCAGAGAAGCTGAGAGTGCATGAAAATGATGAAAATGGTGGTGATCATGATGATGATGATACTATGTTCGCATGCACATTAATGGGAGAACAAATGGAGTATCCTCCATTAGACCTGCGCTTGAGCTTTCTCTAA 552 0.433 MESKGGSSGGSGSKCGRWNPTAEQVEVLSSLFRSGLRTPTTDQIQRISNHLSFYGNIESKNVFYWFQNHKARDRHNKRRKLSTASFHHHHHHRTNNKDLNVLHSQSLAEMYQVSEPDNNNNRVIETLELFPMNSFGESESEKLRVHENDENGGDHDDDDTMFACTLMGEQMEYPPLDLRLSFL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc74g00005 183 MobiDBLite consensus disorder prediction 138 157 - -
Stsc74g00005 183 FunFam WUSCHEL-related homeobox 11 14 83 - -
Stsc74g00005 183 Pfam Homeodomain 15 75 IPR001356 GO:0003677
Stsc74g00005 183 CDD homeodomain 17 77 IPR001356 GO:0003677
Stsc74g00005 183 MobiDBLite consensus disorder prediction 139 157 - -
Stsc74g00005 183 Gene3D - 14 82 - -
Stsc74g00005 183 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 3 97 IPR044555 GO:0003700|GO:0099402
Stsc74g00005 183 SUPERFAMILY Homeodomain-like 12 80 IPR009057 -
Stsc74g00005 183 ProSiteProfiles 'Homeobox' domain profile. 11 76 IPR001356 GO:0003677
Stsc74g00005 183 SMART HOX_1 13 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc74g00005 Stsc-Chr74 23549 24500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc74g00005 4 183 Wox Gene Family AT3G11260 52.688 1.82e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc74g00005 Homeodomain 6.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc74g00005 - - gmx:100820304 206.068