Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc73g00009 ATGCAATTGAAGCATAACAATAATAACCAACACACAATAACAATGGCTCCTAAAAAACTGAAATATGTTATTGGTGTTGTGGGTGTTATTGTTTGTTTGGCAACATTTTTTAAGCCAACGTATGGTTATGGGTTGAGTGCTGATTATTATGAGAGAGTGTGCCCTCAGGCATTGCCAACCATTGAGGGTGTTGTAAAGCAAGGAATCAATCGTGAAGCAAGAAATGGAGCATCTTTGTTGCGTTTACATTTCCATGATTGCTTCGTTAATGGCTGTGATGGATCGGTTCTACTGGATGACACTCCTGATATGAAGGGAGAGAAGACAGCAACCCCAAATAACAACTCACTCAGAGCTTTTGATATTGTTGATGAAATCAAAGCAGCTGTGGATAAAGCTTGCAATGGCCCTGTTGTGTCTTGTGCTGATATTCTTGCCGTTGCTGCTCGTGATTCTGTATCCATTTTGGGAGGTAGACAATACTACTACAATGTGTTGTTGGGCAGAAGAGATGCAACATCTACATGCATGGAGGATGCAAACAACCAGCTTCCGTTGGCGAACGCCGCCTTCTCCGAAATTCTCAGCAAAAACTTCCAGCCTAAAGGGCTCAACCTCAAAGACATGGTGGTTCTCTCCGGCGCGCACACCATTGGATTAGCAAAATGTGATTCCTTCAAAGGAAGGCTCTACAATGACACCAACATTGACCCGAATTTCGCTACATCATTGAAGCAATCTTGTCCTCCCAGTGGTGGATCAAATTTGAAAGCTTTGGATGTTAGTTCTGCTAAAATTTTTGACACCAATTATTACTCTGATCTGTTGCAGAGAAAGGGTCTTCTTCATTCTGATCAAGAACTCTATAAGGGTAATGGTTGTGAGAGTGATCAATTGGTGAAGCTCTATAGTAGTAACCCTGATGCTTTTGCTAAGGATTTTGCAGTTTCCATGATTAAGATGGGTAATATTAAGCCTTTGCTTGGGAATCAAGGAGAAGTTAGGTGTAATTGCAGAAAAGTCAATTCTGGATACTACAAGTATTAA 1047 0.4107 MQLKHNNNNQHTITMAPKKLKYVIGVVGVIVCLATFFKPTYGYGLSADYYERVCPQALPTIEGVVKQGINREARNGASLLRLHFHDCFVNGCDGSVLLDDTPDMKGEKTATPNNNSLRAFDIVDEIKAAVDKACNGPVVSCADILAVAARDSVSILGGRQYYYNVLLGRRDATSTCMEDANNQLPLANAAFSEILSKNFQPKGLNLKDMVVLSGAHTIGLAKCDSFKGRLYNDTNIDPNFATSLKQSCPPSGGSNLKALDVSSAKIFDTNYYSDLLQRKGLLHSDQELYKGNGCESDQLVKLYSSNPDAFAKDFAVSMIKMGNIKPLLGNQGEVRCNCRKVNSGYYKY 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc73g00009 348 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Haem peroxidase superfamily signature 208 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 ProSiteProfiles Plant heme peroxidase family profile. 44 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Plant peroxidase signature 207 219 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 Gene3D - 48 339 - -
Stsc73g00009 348 PANTHER PEROXIDASE 72-RELATED 44 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 Gene3D Peroxidase, domain 2 185 321 - -
Stsc73g00009 348 FunFam Peroxidase 185 321 - -
Stsc73g00009 348 Pfam Peroxidase 64 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 CDD secretory_peroxidase 44 341 IPR033905 GO:0004601|GO:0042744
Stsc73g00009 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 208 218 IPR019793 -
Stsc73g00009 348 SUPERFAMILY Heme-dependent peroxidases 44 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc73g00009 348 FunFam Peroxidase 48 194 - -
Stsc73g00009 348 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc73g00009 Stsc-Chr73 79519 81968 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc73g00009 45 342 Peroxidase AT5G05340 51.827 4.56e-110 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc73g00009 K00430 - gmx:100810852 405.216