Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc73g00004 ATGACCACTGATACCCATGCCTTGGAGAAATTTAAGGGATGTGATGGATCAGTTCTATTGGATGATACAGAATTGTTGAAGGGAGAGAAGACAGCAGGACCAAACTTGAATTCATTAAGAGGATTCGAGGTGGTTGATGAAATCAAAGAAGCTGTAGACAATGCCTGCCATGGCTCTGTAGTCTCTTGTGCTGATATCTTAGCAATTGCAGCTCGTGATTCCATAGCCATTTTGGGAGGTAAACAATATTGGTACCAAGTGTTATTAGGAAGAAGAGATGCAAGAACAGCAAGCTTGGATGATGCAAACAAAAGTCTCCCTCCACCATTTTCAAACTTCTCAATGCTCCTTCAATTTTTTCAGCCTCATGGATTGGACCTTAAGGATCTCGTGGCACTCTCCGGCGGCCACACCGTCGGATTCGCCAAGTGCTCTTCCTTCAAGGACAGGATCTACAACGACACCAACATTGATCCTTATTTTGCAACCACTTTGAGAAACTCATGCCCTAGAATAATTAGTACTAATGGTGACAATAATTTATTGGCACCATTGGATGCTACTCCTGGAATTGGTGACACAAATTATTACACTGCTTTGTTGAATAAAAGGGGGCTTCTTCATTCAGATCAAGAGCTATATAAGGGTGATGGTGGTGAGAGTGATGAGTTGGTGAAGCTTTATAGTAGTAACCGTAATGCCTTTGCTAAGGACTTTGGATATTCCATGGTTAAAATGGGTAACATTAAGCCTCTTACTGGATATGAGGGAGAAATTAGGTTCAATTGCAGAAAAGTCAACTAA 804 0.4142 MTTDTHALEKFKGCDGSVLLDDTELLKGEKTAGPNLNSLRGFEVVDEIKEAVDNACHGSVVSCADILAIAARDSIAILGGKQYWYQVLLGRRDARTASLDDANKSLPPPFSNFSMLLQFFQPHGLDLKDLVALSGGHTVGFAKCSSFKDRIYNDTNIDPYFATTLRNSCPRIISTNGDNNLLAPLDATPGIGDTNYYTALLNKRGLLHSDQELYKGDGGESDELVKLYSSNRNAFAKDFGYSMVKMGNIKPLTGYEGEIRFNCRKVN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc73g00004 267 Gene3D Peroxidase, domain 2 107 246 - -
Stsc73g00004 267 PANTHER PEROXIDASE 72-RELATED 11 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 Gene3D - 12 264 - -
Stsc73g00004 267 CDD secretory_peroxidase 13 266 IPR033905 GO:0004601|GO:0042744
Stsc73g00004 267 ProSiteProfiles Plant heme peroxidase family profile. 12 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 FunFam Peroxidase 107 246 - -
Stsc73g00004 267 PRINTS Plant peroxidase signature 40 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Plant peroxidase signature 60 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Plant peroxidase signature 128 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Plant peroxidase signature 199 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Plant peroxidase signature 241 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Plant peroxidase signature 183 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Haem peroxidase superfamily signature 61 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Haem peroxidase superfamily signature 81 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 PRINTS Haem peroxidase superfamily signature 129 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 Pfam Peroxidase 12 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc73g00004 267 ProSitePatterns Peroxidases proximal heme-ligand signature. 129 139 IPR019793 -
Stsc73g00004 267 SUPERFAMILY Heme-dependent peroxidases 12 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc73g00004 Stsc-Chr73 57294 60322 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc73g00004 13 267 Peroxidase AT5G05340 54.688 8.53e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc73g00004 K00430 - gmx:100810852 368.237