Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc738g00002 ATGGTCCACCCGCTCCTAACACAGGTCCACCCTGTTTATTCTGATAGCTACAAGACCCGGCAATATGCTGAGTTTCCTTATTCTTGGGGTGAATTATCATCAGATGAGGATCTTGATGAGAGAAAAGCGTTGCTAATGGCGGTGGATGCTGTGGTGGCTTTGGATGGTAGTGGGAACCACACAAGTGTGAAGGGTGCTGTGGAAACAGCGCCTGAGTATAGCATGAAGCGTTATGTGATACACATCAAGAAGGGTGTGTACAGTGAGAGAGTTGATATCGATGGCAAGAAGTGGAACATTGTGATGATTGGAGATGGCATGGATAATACAATTATCACTGGTAACTTGAGTTATAATCGTAATAATCTCACCACATACTACACTGCAACCTTTGCTGTGAAAGCGAGAGGATTCATAGCACGTGACATTTCCTTCCAGAACACAGCAGGGCCAAGAGGTGGCCAAGCAGTGGCACTAAGATCCGACTCCGACCTCTCCGTCTTCTACCGCTGCGGAATCTCCGGCTACCAAGACACCCTGTACGCGCACGCCTCCCGCCAATTCTACCGAGAATGCATCATCACCGGCACCGTCGACTTCATCTTCGGCCACGCAACCGCAGTCTTCCAGAACTGCACCATACTCGCCAAGAAACCCTTGCCGGACCAAACCAACACCATAACGGCTCAAGGCGCAAACGACTCCACCGAAACCTCCGGCTTCTCCTTCCAATTCTGCAATATCTCTGCACACTCTGAGCTTCTACCGTTCATGAACTCCACAAGAACGTACCTTGGGAGACCATGGAAGAAATATTCAAGAACTGTTTTCATGCAATCTTATATGAGTGAGATGGTGAGGCCTGAAGATTGGAAAGAGTGGAATGGGACTTTATATTTGGACACGCTTTATTACGGTGAGTTCTTGAATTATGGGCCTGGATCTGGGCTTTCTCAGAGAGTTAAGTGGGCCGGGTATCATGTGATGAATGGTTTTAATGACGCTAGTAACTTCACAGTGGCCCAATTTATTCTGGGGGATCTATGGTTGCCATCAACGGGTGTGAATTATTCATCTGGTTTTACTAAATAG 1092 0.4753 MVHPLLTQVHPVYSDSYKTRQYAEFPYSWGELSSDEDLDERKALLMAVDAVVALDGSGNHTSVKGAVETAPEYSMKRYVIHIKKGVYSERVDIDGKKWNIVMIGDGMDNTIITGNLSYNRNNLTTYYTATFAVKARGFIARDISFQNTAGPRGGQAVALRSDSDLSVFYRCGISGYQDTLYAHASRQFYRECIITGTVDFIFGHATAVFQNCTILAKKPLPDQTNTITAQGANDSTETSGFSFQFCNISAHSELLPFMNSTRTYLGRPWKKYSRTVFMQSYMSEMVRPEDWKEWNGTLYLDTLYYGEFLNYGPGSGLSQRVKWAGYHVMNGFNDASNFTVAQFILGDLWLPSTGVNYSSGFTK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc738g00002 363 Gene3D - 45 361 IPR012334 -
Stsc738g00002 363 PANTHER PECTINESTERASE 44 351 - -
Stsc738g00002 363 SUPERFAMILY Pectin lyase-like 45 360 IPR011050 -
Stsc738g00002 363 FunFam Pectinesterase 44 361 - -
Stsc738g00002 363 Pfam Pectinesterase 49 347 IPR000070 GO:0030599|GO:0042545
Stsc738g00002 363 ProSitePatterns Pectinesterase signature 2. 194 203 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc738g00002 Stsc-Chr738 4637 6276 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc738g00002 39 361 Carbohydrate Esterase AT4G33220 65.031 7.05e-157 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc738g00002 K01051 - gmx:100798620 464.151