Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc736g00002 ATGGGAGTAACTATCCACTGTTCTTACACCATAACCCCCTCAAATTCCTCTCCCACTACAACAATTATCCCTTTGTCACACTGTCAACAAACCAAGCTTCCTAACCATGGATCCCAACTTTACCTCTACAACACTTCTAACTCTCCTCCTTCAATTGAAAATCTCAGAGCCTCACTCACCAAAGCCTTGAATCTCTACTACCCCTTAGCTGGAAGGCTCACATGGATCCATGGTGGTCGATTAAACCTTCTCTGCAACTCAAAGGGCGTCACACTATCGGAAGCCACGTGTCACGATCATCACACAACCGTGGATGAGCTTCTCCGGAACCTCGATAACGGTGTTTTGCTGGAGCAGTTTTTGCCCAAGGTTGACTACAGCGTTGACCGGATCGAGGAGATGCCGTTGATGGCGGCCCAGATCACGAGGCTTCCGTGCGACGGCGTCGTTTTGGGAGCGGTTTTTTGTCGCGTTGTGGTTGACGGAGCGAGTCTTGGGAATTTCATGAGTTCGTGGTCGAGATTGGCGAGAGGTGAAGATTTGGATTCGAGTTTGTTGGTTCCGGTTCATGATCGAGGTATTTTGGATTCGCTTGGTGTGAGTGTGGGTTCTAGATTTGAACATGATGAATTTCTAACACCGCCACTCTGGGAAGAAGAAGAACAAGAACGGGGAAGACGTGAGAGTGACGAGCTTGGTAGTGTTGTTTTGAAACTCAGCAAAGGCCAAGTTGAGAAGCTCAAGAAGAAAGCTCGTCATCGTTACGATAAAGATCTCTTTGGCAATGGTTCAAACTCATCAGCACTTTCTTCAAGCAGGCCTTATACTAGTTTTGAGGTCATAAGTGGTCACTTATGGAGGTGTGTTTGCAAGGTGAAGAATGGGGGTAATTGGAGCCAAAAAACAAGGGTCACTGCATTGGTGAATTGCAGGAACAGAGTTAAACCAAATCTTCCTCAAAGCTACTTTGGGAATGCAACATTTCCTACCGTGACACCGACTTGTTGCTTCGATGATATTGTTCACAAGCCTCTAGTCTATGCCGTTGCGAATGTGAGGAAAGCGACCGAGCAAATGAATGATGAGTATGTTAGGTCTGCTATTGGTTATATTGCTAATCAGAAGGACATGAATTCATTGAGGGAAAAACTGTATAATCCTGGAGGAGGAAAATCCAGGGTGAATCCGAATTTGTATATTGTGAGTTGGGCTAACTTCCCTTTTTATGAAGTGGATTTCGGGTGGGGAAAGCCAGTTTGTTTGGCTCCGGGAAGCATAAATTCGGACGGGAAGGCCTTCATTATGGACAATGGAAATGGTGATGGCTTCATTGTTGCTATTTGCTTGCAAAAGTCCTATGTTAATGATCTGAAGAAGCTCTTTTATGAGGATATAAAAGAGGTATATCCTAATTCCAAATTGTGA 1425 0.4505 MGVTIHCSYTITPSNSSPTTTIIPLSHCQQTKLPNHGSQLYLYNTSNSPPSIENLRASLTKALNLYYPLAGRLTWIHGGRLNLLCNSKGVTLSEATCHDHHTTVDELLRNLDNGVLLEQFLPKVDYSVDRIEEMPLMAAQITRLPCDGVVLGAVFCRVVVDGASLGNFMSSWSRLARGEDLDSSLLVPVHDRGILDSLGVSVGSRFEHDEFLTPPLWEEEEQERGRRESDELGSVVLKLSKGQVEKLKKKARHRYDKDLFGNGSNSSALSSSRPYTSFEVISGHLWRCVCKVKNGGNWSQKTRVTALVNCRNRVKPNLPQSYFGNATFPTVTPTCCFDDIVHKPLVYAVANVRKATEQMNDEYVRSAIGYIANQKDMNSLREKLYNPGGGKSRVNPNLYIVSWANFPFYEVDFGWGKPVCLAPGSINSDGKAFIMDNGNGDGFIVAICLQKSYVNDLKKLFYEDIKEVYPNSKL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc736g00002 474 Pfam Transferase family 2 462 - -
Stsc736g00002 474 SUPERFAMILY CoA-dependent acyltransferases 19 180 - -
Stsc736g00002 474 Gene3D - 216 463 IPR023213 -
Stsc736g00002 474 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 451 - -
Stsc736g00002 474 Gene3D - 1 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc736g00002 Stsc-Chr736 15587 20451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc736g00002 1 463 Monolignol Biosynthesis Gene Families AT5G48930 29.979 4.48e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc736g00002 K13065 - gmx:100819383 462.996