LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc735g00003	ATGGCAAGAAAATCCACTCTTCTTATTAGATCATCATTTCTTTGGTTCTTGTTCATGATAAGCCTCTTCATCACCTTCACCACAACAACAGCACAATCATCATCATCCCCAAAATACGTTGGAGATGGCTGCGGGAACTCAACAGAACAATCTCCATTAACAAGTGGATACAAAACCAACCTCAACAACATCCTCTCATGGCTTTCCTCGGATGCTGCCACCAGCAAGGGCTACAACCACACCGTCATTGGAACCGCCACAAGCGACGCCGTCTATGGCCTCTATAACTGCAGAGGTGACGTCACGGGCACCTTCTGCCAATTTTGCGTCTCCACTGCAGCATCAGACATTCTTCGGCGCTGTCCAAACAAGTCATCGGCAGTGATATGGTATGACTACTGCATACTCAGGTACTCCAATCATGACTTCTTTGATAACCTTACAATGACCCCAATTTGGTCGACTCCTGGGACCAAGAACGCCACCAACAGCACACAAGAAATCCAGAAAGGGGAGACTTACATTCAGAGTTTGATAAAGAATGCAACTTCGGAGAACAACCTGTTATATGCACTGGGTGAGTTCAATCCCGGTGGCTCATTAGGGAAAAGGTATGGGTTGGTGCAGTGCACTATGGACCTTACTAGTGAGCAGTGTAGGAAGTGTTTGAATGGTATGTTGGATCAAGTTCCCAAATGCTGTGCTGCAAAAGTTGGATATCAGGTTGGCTCTCCAAGCTGTTTGATCAAGTATGATGATTATATGTTCTACAAGATTTCTATGAGTCCAGGATCCTCTCCTTCGCCTGATTCAGCCAAGAACAATTCAAGTAAGACAAAAACTTTGATCATCCTCATAGTTAGTGTGTTGGTGGCAATAGTCCTACTAAGTTGTGGCATCTACTTCTTATGGTGGAAGAATCACTCAAAAAACAATGATGTATTATTGTCGAAGAGCACTCTTATGTCAATACATTATACCTCTCAACATCTAGAAGACGATTCACTGAATGCTGACCTTCCTACAGTCCCTCTAATATGTATTCAACAGAGCACTGATAATTTTTCAGATTCTTGCAAATTGGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGTTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTCTCACAAGCATCTAGTCAAGGTATAGATGAGTTTAAGAATGAAGTAATCTTCATAGCCAAACTGCAACATAGGAACCTTGTGAGATTATTGGGTTGCTGTGTTGAGAAAAATGAAAAGCTACTTGTATATGAGTACATGTCAAATTCTAGCCTTGCCTTTCACCTGTTCGATGAGGAGCAAAGAAAGCAACTAGATTGGAAGTTGCGAATAAATATTATTAATGGACTTGCAAAAGGACTTCTATATCTTCACGAAGATTCTAGACTCAGGATAATTCATCGAGATTTGAAAGCTAGTAATGTTCTACTCGATGATTGTATGAATCCAAAAATATCAGATTTCGGAATGGCAAGAGCATTTGAAAATGAACAAAATCAAGAAAATACCACAAGAGTTATGGGCACCTATGGATATATGGCTCCAGAATATGCTATGGAAGGATTATACTCCGTAAAATCTGACGTTTTTAGTTTTGGAGTTCTTATGCTAGAAATTATTAGCGGCAAAAAGAATAATGGATTCTATTTTTCGGAACATGGTCAAAGTCTTCTTATATATAGTTGGAGACTATGGTGTAAAGGAGAATGTTTGAAGCTGGTAGATTCTATACTAGAAAATACATACACAAGAAATGAAGTTACAAGGTGTATACATATTGGCTTATTGTGTGTACAAGAAGATGCAGTAGATCGACCAACAATGTCCACAGTTGTTGTCATGCTAGCAAGTGAGACAATGATTCTTCCTAATCCTAAGCATCCTGCATTTTCTGTTGGAAGAAAGATCAGAGAAGAAGAACCAACATCAAATGCCTCTAATGTAGATCCTTCTATCAATAATATAACAATTTCAAGTATTTTACCTAGGTAA	2025	0.397	MARKSTLLIRSSFLWFLFMISLFITFTTTTAQSSSSPKYVGDGCGNSTEQSPLTSGYKTNLNNILSWLSSDAATSKGYNHTVIGTATSDAVYGLYNCRGDVTGTFCQFCVSTAASDILRRCPNKSSAVIWYDYCILRYSNHDFFDNLTMTPIWSTPGTKNATNSTQEIQKGETYIQSLIKNATSENNLLYALGEFNPGGSLGKRYGLVQCTMDLTSEQCRKCLNGMLDQVPKCCAAKVGYQVGSPSCLIKYDDYMFYKISMSPGSSPSPDSAKNNSSKTKTLIILIVSVLVAIVLLSCGIYFLWWKNHSKNNDVLLSKSTLMSIHYTSQHLEDDSLNADLPTVPLICIQQSTDNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSQASSQGIDEFKNEVIFIAKLQHRNLVRLLGCCVEKNEKLLVYEYMSNSSLAFHLFDEEQRKQLDWKLRINIINGLAKGLLYLHEDSRLRIIHRDLKASNVLLDDCMNPKISDFGMARAFENEQNQENTTRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLMLEIISGKKNNGFYFSEHGQSLLIYSWRLWCKGECLKLVDSILENTYTRNEVTRCIHIGLLCVQEDAVDRPTMSTVVVMLASETMILPNPKHPAFSVGRKIREEEPTSNASNVDPSINNITISSILPR	674

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc735g00003	674	Pfam	Domain of unknown function (DUF3403)	628	674	IPR021820	GO:0004674
	Stsc735g00003	674	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	476	488	IPR008271	GO:0004672\|GO:0006468
	Stsc735g00003	674	SUPERFAMILY	Protein kinase-like (PK-like)	341	641	IPR011009	-
	Stsc735g00003	674	Gene3D	Phosphorylase Kinase; domain 1	317	430	-	-
	Stsc735g00003	674	SMART	serkin_6	355	607	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc735g00003	674	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	43	669	-	-
	Stsc735g00003	674	Gene3D	-	150	256	IPR038408	-
	Stsc735g00003	674	Gene3D	-	38	143	IPR038408	-
	Stsc735g00003	674	Pfam	Salt stress response/antifungal	169	254	IPR002902	-
	Stsc735g00003	674	Pfam	Salt stress response/antifungal	44	140	IPR002902	-
	Stsc735g00003	674	CDD	STKc_IRAK	361	626	-	-
	Stsc735g00003	674	FunFam	cysteine-rich receptor-like protein kinase 10	431	633	-	-
	Stsc735g00003	674	Pfam	Protein tyrosine and serine/threonine kinase	359	624	IPR001245	GO:0004672\|GO:0006468
	Stsc735g00003	674	FunFam	Cysteine-rich receptor-like protein kinase 28	40	142	-	-
	Stsc735g00003	674	Gene3D	Transferase(Phosphotransferase) domain 1	431	633	-	-
	Stsc735g00003	674	ProSiteProfiles	Gnk2-homologous domain profile.	38	143	IPR002902	-
	Stsc735g00003	674	ProSiteProfiles	Protein kinase domain profile.	355	641	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc735g00003	674	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	319	430	-	-
	Stsc735g00003	674	ProSiteProfiles	Gnk2-homologous domain profile.	149	256	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc735g00003	Stsc-Chr735	9197	14802	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc735g00003	17	674	Receptor kinase-like Gene Family	AT4G05200	42.398	2.26e-175	514

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Stsc735g00003		PK_Tyr_Ser-Thr	2.7e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc735g00003	-		-	ahf:112718031	1011.52