Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc735g00002 ATGGCTCCCGAATATGCTATGGAAGGATTATATTCAGTAAAATCTGATGTTTTTAGTTTTGGAGTTCTTCTACTTGAAATCATTTGTGGCAAAAGGAACAGCAGATTCTATCTTTCAGAACATGGACAAAGTCTTCTTGTATATAGTTGGAGATTATGGTGTGAAGGAGAATGTTTGAAGCTGGTAGATCCTATACTAGGAAATACATACGCAAGAAATGAAGTTACAAGGTGTATACATGTTGGTTTACTATGTGTACAAGAAGATGCAGTAGATCGACCAACAATGTCCACAGTTGTTGTTATGCTAGCAAGTGAGACAATGACTCTTCCTAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGATCAATAAAGAAGAAGAGTCAACGTCAAAGGCTTCTAACAAGGATGCTTCCGTCAATAAAATATCAGTTTCAAATATTTTACCTAGGTAA 459 0.3573 MAPEYAMEGLYSVKSDVFSFGVLLLEIICGKRNSRFYLSEHGQSLLVYSWRLWCEGECLKLVDPILGNTYARNEVTRCIHVGLLCVQEDAVDRPTMSTVVVMLASETMTLPNPNHPAFSVGRKINKEEESTSKASNKDASVNKISVSNILPR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc735g00002 152 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Stsc735g00002 152 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc735g00002 152 Pfam Protein tyrosine and serine/threonine kinase 1 100 IPR001245 GO:0004672|GO:0006468
Stsc735g00002 152 SUPERFAMILY Protein kinase-like (PK-like) 1 118 IPR011009 -
Stsc735g00002 152 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 147 - -
Stsc735g00002 152 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 108 - -
Stsc735g00002 152 Pfam Domain of unknown function (DUF3403) 105 152 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc735g00002 Stsc-Chr735 7521 8325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc735g00002 1 152 Receptor kinase-like Gene Family AT4G23150 47.134 6.71e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc735g00002 PK_Tyr_Ser-Thr 5.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc735g00002 - - ahf:112718031 264.233