Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc735g00001 CAACGAGACGACTCATTGAATGCTCAGGACCTTCCTACAGTCCCTCTAATTTGGATTCGACGGAGCACAAATAACTTTTCAGATTCTTGCAAACTAGGGCAAGGTGGATTTGGTCCTGTTTATAAGGGAAGTCTACAAGATGGAACAGAAGTTGCCATAAAAAGACTCTCGCAAACATCTGATCAAGGTTTAGACGAGTTCAAGAATGAAGTAATCTTCATAGCCAAATTACAACACAGGAACCTTGTGAGATTGCTGGGTTATTGTGTTGAGGAAAATGAAAAGCTGCTTGTGTACGAGTACATGTCCAATTCAAGCCTTGCCCTTCATCTATTCGATGTAGAAAAACGAAAGCAACTATGTTGGAAGGTTCGGATGCATATTATTAATGGAATTGCACGCGGACTTCTATATTTTCATGAAGATTCAAGACTTAAAGTAATTCATAGAGATATGAAAGCTAGCAATATTCTACTCGATGAAGATATGAATCCTAAAATATCAGATTTTGGATTGGCAAGAGCATTTGAAAAAGGCCAAAATTATGAAAATACTGGAAGAATTATGGACACCTAG 576 0.3785 QRDDSLNAQDLPTVPLIWIRRSTNNFSDSCKLGQGGFGPVYKGSLQDGTEVAIKRLSQTSDQGLDEFKNEVIFIAKLQHRNLVRLLGYCVEENEKLLVYEYMSNSSLALHLFDVEKRKQLCWKVRMHIINGIARGLLYFHEDSRLKVIHRDMKASNILLDEDMNPKISDFGLARAFEKGQNYENTGRIMDT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc735g00001 191 Gene3D Transferase(Phosphotransferase) domain 1 102 191 - -
Stsc735g00001 191 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 101 - -
Stsc735g00001 191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Stsc735g00001 191 ProSiteProfiles Protein kinase domain profile. 26 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc735g00001 191 SMART serkin_6 26 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc735g00001 191 Gene3D Phosphorylase Kinase; domain 1 1 101 - -
Stsc735g00001 191 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 191 - -
Stsc735g00001 191 SUPERFAMILY Protein kinase-like (PK-like) 10 182 IPR011009 -
Stsc735g00001 191 Pfam Protein kinase domain 28 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc735g00001 191 FunFam Os07g0541700 protein 102 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc735g00001 Stsc-Chr735 5928 7402 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc735g00001 19 191 Receptor kinase-like Gene Family AT4G23230 63.584 1.22e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc735g00001 Pkinase 1.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc735g00001 - - ahf:112718031 333.569