Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc728g00002 ATGGCTGCAGGCAGAGCTTTACTCTCTTCCTTTGTTGATGCTGTTTTGAATAAGCTGTCTTCATTTGATGTCAACTTAACTCCACTAAAGAAGCCATCTGACCGGAAGTTTCTTCAGAGACTGAGGGCAGCTCTTCGTGCTGTTCGACCTGTACTTGATGATGCTGAGCAGAAGCAGATCAAAGACCATGAAGTCAAGAGCTGGCTTGTTAATCTCCAAGATGCTCTCTATATGGCTGATGACTTGCTGGATGAACTCTCCACTAAAGCTGCTGTTGCCACTCCCACTCAAACGGATCCAGGTACAACTGATTACTTCAAATATTGTGTTGATGATATCGTGGAAGGTAGTGATAAGATAGTAGATAGGATGCGGGATATAGTTGATACCATGGAGTCTCTTGTTGAAGAGAAAGATGAGTTTCCTCTAGAGAAGGCTGCAAAAGATCTAGATTATATGTCATGGAGAAACGAGACCACATCTCTGCTTGAAGGTTCTGAAATTTATGGCAGGGACAAAGAGAAGGAGGAGATAATAGGAATGCTGTTAGATGATACTTGTCATGGAAAACTTTCTGTCATCTCTATAGAAGGTATGGGGGGAGTTGGAAAAACCACTTTGGCTCAGCTGGTTTACGATGATGCCATTGTGAAGGGAAATTTTGATATTAGAGCATGGGTTTGTGTTGCTACCAAATTTGATCCTGTTAATGTTACAAAAGCTGTAATACAGGAAATCATGTCTTCTTCTTCTGACATGGTTAGTTTGAATTCACTTCAAACTGAATTGCAGAAAAAGTTGACAGGAAAGACATTCTTAGTTGTTTTAGATGATGTTTGGGACAATGAAAAAGATTTGTGGGTCAATTTTCTAAAACCATTTTTGTATGGGAATAAAGGAAGCAAAATTTTGCTAACTACCCGTACTAAAAATGCAGATTGTGTGGAAGCTACTAATCTGCATCGCACTCTAGATACATTGCCTCATGAAAATTGCTGGTCCATATTTTTAAAACATTCATCGCTTTCTGCTAATTCTAGTCAATATACAAGTCTAGAATCAATTGGTAGAAAAATTGTGGAGAAGTGTAAGGGGTTACCTTTGGCTGTGAAGACTCTGGGGGGTTTATTAAGAAACGAGTCTAATGAAGGGGAATGGAAAAATATACTGGAAAGTAGAATTTGGGAACTTCCAGAAGATGAAAGCAAGATTATTCCTGCATTAAGAATTAGTTATGACTCTCTCCCTTCACATTTAAAGAGGTGTTTTGTTTATTGCTCATTATATCCTCAAGATTATCAATTTGACAAAGGCGAGTTAATTTCACTGTGGATGGCTGAAGGTATGTTACAATCAATGGCAAAAAGAACATTAGAAGAAATTGGTTGCTCATATTTTAATGAATTAGTTGCAAAATCATTTTTTCAACCTTCTAGTTCTAATGATAGCTTATTTGTAATGCATGATCTCATGCATGATCTAGCAACATTTTTTGCTGAAAAGTTCTATTTCAGAGTCAAAGAATTTGACAATCCACTCAAGATTGACATCAAAACTCGTCATTTGTCATGTATTGTAAATCGTGTGTGTCCAGTTTCAAGACTTGTCGAAGCTTGCAGTGAAGTAGAACATATGAGAACATTCTTTTTCCCTGTTGTTCAGCCTACTTACTCGGATAAATTTTTTGAGATGGAAAACAATTCTTGTCTCTCCCCACTGGACTTTAAATATTTGAGAGTTCTATCATTTAAATGTTTTCCTCTTGAATCATTACCTGAGTCGATAGGTGAATTGATCCATTTGCGATATTTGGATCTCTCTTCTACACCTATTCTTAGATTGTGCGAGTCATTGTGTAACTTGTACAATTTACAAACGCTGAAGCTGACGTATTGTGAGCACCTCGAGATGCTTCCGGAACAGATGCAAGATCTTGTGAACTTGCGGCATCTTGACGTTGATGGGGCTTCTAGTTTAAAAGAGATGCCTAAAGCAATGAGCAAATTAAAAAAATTGAACTTCTTAAGCTCCTATATTGTTGGTGAGCACGATGAGAACGGAATTAGAGAATTGGCAACACTTGAAAATCTCCATGGGTCATTTCGCATTTCCAAGTTACAGAATGTGAGAAATAGCGGTGAAGCTTTTGAAGCCAAGATAGGTGACAAGAAGCACATTGACATTTTAGTGTTGGAATGGGATTTAAATGATGGCAGTGATGATGTTCAAGCTTCAAGAGATATACTTGACAAGTTACAACCTCATGGAGAGCTGAAATACCTATCAATTGATGGTTATAGGGGTGAAAAATTTCCGGATTGGTTAGGCCTTTCCTCTTACCGCAGCATGACTGAACTGGTGCTGAGAAATTGTAAGATTTGTTCTGAGCTTCCTTCTCTTGGACAGTTACCCTCTCTGAAAGTCTTGTATTTTTGTTGTGTTGATGGGTTGGAGAGAATTGATTGTGAGTTTTACAAGAACAATAAATCATTTCAACAGGAGACACCCTTCAAATCTCTTGAAAGTCTGACATTTGTAGAAATGGCTTGTTGGAAGGAGTGGCATTTTCCTGATGAGTTTGATGGTTTTCCTCAACTTAAAATCCTTTCAATATATTGGTGTCCAGTGTTAACCGGAAATTTACCCAGTCACCTTCCGACTATGGAGGAACTTATCATTGAAGGATGCGGAGAGCTTGCATGTTCACTGCCAAGAGCCCCCAAGCTTCACAAATTAGTTCTACATGGCGTCGGTGAAATGAGGATGGAGTGCATGGCCCACACCCAACCACCCCATCTCCAACTTATTGACATCAGAGAGTCTCGGGCTGACATATCAATTTCATGGGATCATTTGCCAGCTTCATTACAAGAGCTGTATATCTTGGGTTGTTCAAGTTTAACAGTCTCAGGGCAACTGCAACACTCGCTAAAGGAGATATTTATATCTGACTGTGGTTCACTGAAGTTATTCCCATTGGTAGCCCTTCCATATCTTGAGAAACTCCAAATCCATTCATTGGAAAACCTGGAATGCATTGAGGTGCTACAGGATCATGATGACCATGTTCTTCCAAGTCTGAGTGAATTATCGATCGAGTATTGCCCCCTTTTGGTATCCATCTCCACTCTAGTTTTGGCTGCGCCCCACCTAGAGCAACTGACAATACACGGTTCCTCAGAAATTGATTCTTTTCCGGAGGGGGGGCTCCCGCCTAGCTTGAGAGTGCTTGATGTCCATAACTGCCGGAAACTAACAAGGTGGATAATTTCCACGGGTTTGCACAGTGAAGGCCTTACTGAACTTAGGCTTTCTTTTTGCGATAAAGTAAAGTCATTTCCAAGAGAGGGTTGCCTTCCTACCTCCCTTGAGTCTCTAATAATCATAGAATTTGAGGATCTAGAGACGCTAGACTGCAAGGCGCTTCTTCATCTCACCTCCCTCAAAGAATTACATATTGGTTACTGTTCGGAGCTGAAGAATATGACAGAAGAAAGGCTGCCTCCCTCCATTACACAACTCTTCATCTCGGAATGTCCTTTGAGGTCTAAGCTGAAAGAGATGAACAATCCACTGATTGACTCCAAAGATGAATAA 3597 0.3981 MAAGRALLSSFVDAVLNKLSSFDVNLTPLKKPSDRKFLQRLRAALRAVRPVLDDAEQKQIKDHEVKSWLVNLQDALYMADDLLDELSTKAAVATPTQTDPGTTDYFKYCVDDIVEGSDKIVDRMRDIVDTMESLVEEKDEFPLEKAAKDLDYMSWRNETTSLLEGSEIYGRDKEKEEIIGMLLDDTCHGKLSVISIEGMGGVGKTTLAQLVYDDAIVKGNFDIRAWVCVATKFDPVNVTKAVIQEIMSSSSDMVSLNSLQTELQKKLTGKTFLVVLDDVWDNEKDLWVNFLKPFLYGNKGSKILLTTRTKNADCVEATNLHRTLDTLPHENCWSIFLKHSSLSANSSQYTSLESIGRKIVEKCKGLPLAVKTLGGLLRNESNEGEWKNILESRIWELPEDESKIIPALRISYDSLPSHLKRCFVYCSLYPQDYQFDKGELISLWMAEGMLQSMAKRTLEEIGCSYFNELVAKSFFQPSSSNDSLFVMHDLMHDLATFFAEKFYFRVKEFDNPLKIDIKTRHLSCIVNRVCPVSRLVEACSEVEHMRTFFFPVVQPTYSDKFFEMENNSCLSPLDFKYLRVLSFKCFPLESLPESIGELIHLRYLDLSSTPILRLCESLCNLYNLQTLKLTYCEHLEMLPEQMQDLVNLRHLDVDGASSLKEMPKAMSKLKKLNFLSSYIVGEHDENGIRELATLENLHGSFRISKLQNVRNSGEAFEAKIGDKKHIDILVLEWDLNDGSDDVQASRDILDKLQPHGELKYLSIDGYRGEKFPDWLGLSSYRSMTELVLRNCKICSELPSLGQLPSLKVLYFCCVDGLERIDCEFYKNNKSFQQETPFKSLESLTFVEMACWKEWHFPDEFDGFPQLKILSIYWCPVLTGNLPSHLPTMEELIIEGCGELACSLPRAPKLHKLVLHGVGEMRMECMAHTQPPHLQLIDIRESRADISISWDHLPASLQELYILGCSSLTVSGQLQHSLKEIFISDCGSLKLFPLVALPYLEKLQIHSLENLECIEVLQDHDDHVLPSLSELSIEYCPLLVSISTLVLAAPHLEQLTIHGSSEIDSFPEGGLPPSLRVLDVHNCRKLTRWIISTGLHSEGLTELRLSFCDKVKSFPREGCLPTSLESLIIIEFEDLETLDCKALLHLTSLKELHIGYCSELKNMTEERLPPSITQLFISECPLRSKLKEMNNPLIDSKDE 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc728g00002 1198 SUPERFAMILY L domain-like 486 1180 - -
Stsc728g00002 1198 Gene3D Ribonuclease Inhibitor 1022 1189 IPR032675 -
Stsc728g00002 1198 FunFam Probable disease resistance protein At1g61300 154 319 - -
Stsc728g00002 1198 PANTHER DISEASE RESISTANCE PROTEIN RP 48 896 IPR044974 GO:0006952
Stsc728g00002 1198 FunFam Probable disease resistance protein At1g63360 412 497 - -
Stsc728g00002 1198 Gene3D Ribonuclease Inhibitor 557 923 IPR032675 -
Stsc728g00002 1198 Pfam Rx N-terminal domain 11 91 IPR041118 -
Stsc728g00002 1198 SUPERFAMILY RNI-like 836 1086 - -
Stsc728g00002 1198 PRINTS Disease resistance protein signature 266 280 - -
Stsc728g00002 1198 PRINTS Disease resistance protein signature 363 377 - -
Stsc728g00002 1198 PRINTS Disease resistance protein signature 193 208 - -
Stsc728g00002 1198 PRINTS Disease resistance protein signature 619 635 - -
Stsc728g00002 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 426 IPR027417 -
Stsc728g00002 1198 Pfam NB-ARC domain 172 413 IPR002182 GO:0043531
Stsc728g00002 1198 Gene3D - 154 318 IPR027417 -
Stsc728g00002 1198 Gene3D - 326 416 IPR042197 -
Stsc728g00002 1198 Gene3D - 12 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc728g00002 Stsc-Chr728 10200 14827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc728g00002 163 680 WRKY Transcription Factor Family AT5G45050 23.579 9.86e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc728g00002 - - ahf:112708719 1205.28