Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc71g00012 | ATGGTTTGGTCTAGTGATACAAGTGGGAAAGAGGTTTCTTCAATGGAATTGAAGAACACTGGGAATTTGGTTTTGCTTGGGAGTAATGATAATGTAGTGATGTGGCAGAGCTTCAATTACCCGACCGATGCATTGCTGCCATTGCACGAATTCAATGAGGGAATGAAACTTGTTAGTGAACCTGATTCTAAGAACTTTAGCTGTGTTCTTGAGATTGGTTCATCCGGTGATGTCACTCTTTCGGCCGTCTTACAAACTCTGCAGCCAATGCCATATTGGTCTATGCAGAGTGATAGCCGAAAAATTGTCAACAAAGGTGGCAATGAAGTGGCTTCAGCAACCATTGTTGAAAATTCTTGGAGATTCTATGACAAGAAAAAATCATTGTTGTGGGAATTTGTTTTTATAGATAATCAGGCTGTGAATGATACTTGGACTGCAGTGCTGTGTAGCTGTCTTTCTGTTCTAAGCTCTAGGCCTAGTTGCAAGCCTAGTTTTGCTTCTCCTTGTAACTCGAAAGCTGCAATTGAGCTAGTTAAAGCCGAGGATGGACTAAACTACTTTGAGCTTGGGTTTATTCAACCTTTTTCGAGAACTGATCTGATTGGTGGTTGCAAGAATTCCTGCAGCGAAAATTGTTTATGCCTCGCTATGTTCTTTCAAGAAAGTTCAAGAAATTGTTTTCTGTTGGATCGGATCAGAAGCTTTGAGAAAACTAATAAAGATTTCGATTTTCTCTCTTACATTAAGGTCTCTAGCATTGGTGGCACTGGTAAGGGTGTAGTGGAAATGAAAAGTGATATCCCGGCCGCCAAGCCTTCGTCCCAAGAGAATTCAGAAGGTGGCAATTTCTTGGAGAACTTAACAGGCATGCCACTTCTTGCTTACGAGTACATGGCTAATGGCTCATTGGATAAGTGGATATTGAATCAAAACAAAGCAGAATTTTCATTGGATTGGGATACAAGGTTCAATGTAGCGCTTGGAACTGCGAAAGGACTCACATACCTCCACAAAGATTGCGACTCGAAGATTGTTCATTGTAACATCAAACCAGAAAATGTGCTTCTAGATGAGAAATTCAATGCAAAAGTTACGGATTTCGGTCTAGCCAAGCTCATAACACAGTTAATCGGCGGTCGGAAAAACTATGATCCGGCTGAAAGCTCAGAGAAATCTTCTTTCCCATATTTTACATTCAAGATGATGGAAGAAGGGAAACTTAGAGACATTATTGATTCAGATTTGAAACCATATGAAGATGCTGAGAGGGTACAAGTTGCAATCAAAGTTGCATTGTGGTGCATACAAGAAGACATGAATCCAAGGCCTTCAATGACCAAAGTTGTGCAAATGCTTGAAGGTCTTTGCACGCACCCTACCACAGATTCAGGTGATGATGAAATGAACTTAAACGGATCCGTGGCATGGTGCCACGGATTTAGGTTCGTGGAGAATTCAATGTGCCACGCCTATAAATACCAAGTGGTGGTCCCTGGTGAGGATGTGCGGCGAGCTAAGATGGCGGAGGCGGAGGACGGTGAGCGGGACACGAGGCGACGAAGCAAAGCGAGCCGGTTGGGAATAGGTGGATTATGCAATTATTAA | 1608 | 0.4241 | MVWSSDTSGKEVSSMELKNTGNLVLLGSNDNVVMWQSFNYPTDALLPLHEFNEGMKLVSEPDSKNFSCVLEIGSSGDVTLSAVLQTLQPMPYWSMQSDSRKIVNKGGNEVASATIVENSWRFYDKKKSLLWEFVFIDNQAVNDTWTAVLCSCLSVLSSRPSCKPSFASPCNSKAAIELVKAEDGLNYFELGFIQPFSRTDLIGGCKNSCSENCLCLAMFFQESSRNCFLLDRIRSFEKTNKDFDFLSYIKVSSIGGTGKGVVEMKSDIPAAKPSSQENSEGGNFLENLTGMPLLAYEYMANGSLDKWILNQNKAEFSLDWDTRFNVALGTAKGLTYLHKDCDSKIVHCNIKPENVLLDEKFNAKVTDFGLAKLITQLIGGRKNYDPAESSEKSSFPYFTFKMMEEGKLRDIIDSDLKPYEDAERVQVAIKVALWCIQEDMNPRPSMTKVVQMLEGLCTHPTTDSGDDEMNLNGSVAWCHGFRFVENSMCHAYKYQVVVPGEDVRRAKMAEAEDGERDTRRRSKASRLGIGGLCNY | 535 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc71g00012 | 535 | Gene3D | - | 1 | 81 | IPR036426 | - | |
Stsc71g00012 | 535 | ProSiteProfiles | Protein kinase domain profile. | 179 | 535 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc71g00012 | 535 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 71 | IPR001480 | - | |
Stsc71g00012 | 535 | SUPERFAMILY | Protein kinase-like (PK-like) | 291 | 454 | IPR011009 | - | |
Stsc71g00012 | 535 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 2 | 59 | IPR036426 | - | |
Stsc71g00012 | 535 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 2 | 261 | - | - | |
Stsc71g00012 | 535 | FunFam | Protein kinase superfamily protein | 299 | 373 | - | - | |
Stsc71g00012 | 535 | Pfam | D-mannose binding lectin | 2 | 51 | IPR001480 | - | |
Stsc71g00012 | 535 | Pfam | Protein kinase domain | 294 | 376 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc71g00012 | 535 | Gene3D | Transferase(Phosphotransferase) domain 1 | 376 | 475 | - | - | |
Stsc71g00012 | 535 | Gene3D | Transferase(Phosphotransferase) domain 1 | 299 | 375 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc71g00012 | Stsc-Chr71 | 83636 | 89046 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc71g00012 | 247 | 455 | Receptor kinase-like Gene Family | AT5G20050 | 33.210 | 4.90e-32 | 126 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Stsc71g00012 | Pkinase | 7.3e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc71g00012 | - | - | shis:125192036 | 421.394 |