Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc719g00001 ATGGGAGAATCCACGGCTAGGGTTTTCCCTAACCTTCAGTATGAGCAGCAACCGCAGTACACTGCGGGTATCATCAAGAAGATTCGACTGGAGAACTTCATGTGCCATGAAAACTTCGAGATGGAGTTCGGAGAAAACGTCAATTTCGTACTTGGTCAAAACGGAAGTGGTAAGAGTGCAATCCTGGCAGCATTGTGTATTGCATTTGGTAGTCGAGCTAAAGGGACTGACAGGGCAAAGCATTTGAAGGATTTCATTAAAACTGGTTGCAGCAATGCTGTCATCCATGTTGAAATTCAAAATGAAGGAGAAGATGCTTTTAAGCCTGAAATATATGGTGATGCTATCATTGTTGAACGTAGGATATCCGAATCCACATGCTCCATTATTTTAAAAGACCACCAAGGAAGGAGAGTGGTCCATCGGATGGCGGATCTCCGGGAAATGGTTGAGCATTTTAATATTGATGTGGACAATCCATGTGTAATTATGAATCAAGACAAAAGCAGAGAATTTTTGCATTCCGGGAGCATTAAAGATAAATTTAAGGCCACACTCCTGCAACAAGTCAACGATCTCTTGGAAACCATTTCTAAAGAAATAGGTGTTGCACGTGGCATAGTTGAAGACTTGGAGGGTTCAATAAAGCCCATTGAGAAGGAGCTTAATGAGCTGCAAGCCAAAATCAAAGCTATGGAACATATTGAACAAATGTCTGCAGAGATTAGAAAATTAAAGAATAAACTTGCATGGTCTTGGGTCTATGATGTGGATAAGAAGCTTCAGGCGAAAAGTGCAATGATTGATAAGCTAAAGAACCGGATACCTGCCTGCCAAGATAAGATTAATCAACAATTGCTTCAGATTGAAAGATTGAAGGAAGGCATCTCCAAGAAGAAAGATAAAATTGCAACTATGACTGAAAAGTATACACAACTGAAGCAAATTATTGCTGATCAAAGTCAGCTTTGGCCTTTGGCTGAAAAAGAAGTGCTGGTACTTGAGCAAGACTGCAATTCCAAAACTAGCCAAATACAGAAGATGTTACAGCGACTTAAAAAACTTGAACAAGAAGTCCAGGATATTCATGATCTGGATGTGAAAAATACTCAGG 1114 0.4013 MGESTARVFPNLQYEQQPQYTAGIIKKIRLENFMCHENFEMEFGENVNFVLGQNGSGKSAILAALCIAFGSRAKGTDRAKHLKDFIKTGCSNAVIHVEIQNEGEDAFKPEIYGDAIIVERRISESTCSIILKDHQGRRVVHRMADLREMVEHFNIDVDNPCVIMNQDKSREFLHSGSIKDKFKATLLQQVNDLLETISKEIGVARGIVEDLEGSIKPIEKELNELQAKIKAMEHIEQMSAEIRKLKNKLAWSWVYDVDKKLQAKSAMIDKLKNRIPACQDKINQQLLQIERLKEGISKKKDKIATMTEKYTQLKQIIADQSQLWPLAEKEVLVLEQDCNSKTSQIQKMLQRLKKLEQEVQDIHDLDVKNTQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc719g00001 371 Coils Coil 208 248 - -
Stsc719g00001 371 Pfam AAA domain 27 249 IPR038729 GO:0006302|GO:0016887
Stsc719g00001 371 Gene3D - 184 324 - -
Stsc719g00001 371 Gene3D - 24 175 IPR027417 -
Stsc719g00001 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 325 IPR027417 -
Stsc719g00001 371 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 16 364 - -
Stsc719g00001 371 Coils Coil 282 309 - -
Stsc719g00001 371 Coils Coil 338 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc719g00001 Stsc-Chr719 1831 7548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc719g00001 19 371 Structural Maintenance of Chromosomes family AT5G07660 54.342 1.28e-137 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc719g00001 K22804 - gmx:100816916 469.544