Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc704g00006 ATGCAAAGGAACCGCAAATCATCTCGTTGTGGTTGCCAAGCATACTTACGTATTGTAAAAAAGTCAGATTTTGATGTCCCTGAGTGGCGTGTTACTGGTTTTAACAATGTCCACAATCATGAGTTGTTAAAATCCAATGAGGTGCGTCTTATTCCAGCATATTGCACAATATCTCCCGATGACAAGAGCCGCATATGCATGTTTGCTAAGGCAGGAATGTCAGTGAGGCAAATGTTGAGATTGATGGAACTAGAGAAAGGCATTAAAGTAGGTTGCCTTCCTTTTACCGAAATGGATGTGAGAAACTTGTTGCAGTCTTTCAGAAATGTTGAGAGAGACAATGATGCCATTGATCTAGTTGCTATGTGCAAGCGATTAAAAGATGAAAATCAAAACTTCAAGTATGAATTCAAGTTAGACAGTAGTAACAGGCTGGAGCACATTGCGTGGTCTTACAGCTCATCTGTTCAGTCGTATGAGGCATTTGGAGATGCTGTGGTTTTCGACACCACCCACCGAGTAGATGCCTATGACATGCTGTTGGGAATTTGGCTTGGAGTGGACAATCATGGGATGACTTGTTTCTTTGGTTGTACACTTTTACGGGATGAAAATATGCAGTCTTTTTCGTGGGCTTTAAAGGCATTCATGGGCTTCATGAAAGGAAAAGCTCCGCAATCAATATTAACTGATCATAACATGTGGCTGAAAGAAGCTATTGCTGTTGACATGCCTGAAACAAAACATGCCTTTTGTATATGGCATATTCTTTCGAAGTTGTCTGACTGGTTTTCTGTTCTTCTTGGATCTCATTATGATGAATGGAAAGCTGACTTCCTCCAGCTCTACAATTTGGAACTGGTGGAAGATTTCGAAGAAGGTTGGAGGCAAATGGTTGATAAATATCAACTCCACACCAACAAACATATTATTAGCCTACATTCATTAAGGATGTTTTGGGCTCTACCATTCTTGAGGCGTTACTTCTTTGCAGGATTGACCAGCACAAGTCAATCTGAGTCCATTAATGCTTTCATCCAACGGTTCTTGAGTGCTCAATCTCAATTGGACCACTTTGTAGAGCAAGTGGCAGATATTGTTGATTTTAACGACCGTGCTGGATTGAAGCAAAAGATACAACGGAAAGCGCAGAAAGTGTGCCTCAAAACGGGCTCGCCAATCGAATCACATGCTGCCACCGTCCTTACTCCTTATGCCTTAAGTAAACTCCAGGATGAGCTAGTTTTGGCACCGCAGTATGCATCCTTTCTGGTGGTTGAAGGTTGCTTCCAGGTCAGACACCACACTCAGACAGATGGAGGCTGCAAAGTATTTTGGGTTCCTTGTCAAGAGCACATTACCTGCAGCTGTCACCTGTTTGAGTTTTCAGGCACCTTATGCAGACATGTTCTCCGTGTCATGTCAACAAATAACTGTTTTCACATCCCCGACCAATACCTACCCACCCGTTGGAGAGGCAGTGGTTTGTCTACTGTTACCCAGTTTCGGGGTGCGACGACAAGGGATCAGCCTGAAAGGATTCAATTTTTGGAATCCATGGTTTCAACATTTATAATGGAATCCATTGAAACAGAGGANNNNNNNNNNCCGAATCAAAGCCCTTCCAAGGCCGGCACATGGAGTGAATGA 1650 0.4273 MQRNRKSSRCGCQAYLRIVKKSDFDVPEWRVTGFNNVHNHELLKSNEVRLIPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKVGCLPFTEMDVRNLLQSFRNVERDNDAIDLVAMCKRLKDENQNFKYEFKLDSSNRLEHIAWSYSSSVQSYEAFGDAVVFDTTHRVDAYDMLLGIWLGVDNHGMTCFFGCTLLRDENMQSFSWALKAFMGFMKGKAPQSILTDHNMWLKEAIAVDMPETKHAFCIWHILSKLSDWFSVLLGSHYDEWKADFLQLYNLELVEDFEEGWRQMVDKYQLHTNKHIISLHSLRMFWALPFLRRYFFAGLTSTSQSESINAFIQRFLSAQSQLDHFVEQVADIVDFNDRAGLKQKIQRKAQKVCLKTGSPIESHAATVLTPYALSKLQDELVLAPQYASFLVVEGCFQVRHHTQTDGGCKVFWVPCQEHITCSCHLFEFSGTLCRHVLRVMSTNNCFHIPDQYLPTRWRGSGLSTVTQFRGATTRDQPERIQFLESMVSTFIMESIETEXXXXPNQSPSKAGTWSE 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc704g00006 549 Pfam MULE transposase domain 166 258 IPR018289 -
Stsc704g00006 549 Pfam FAR1 DNA-binding domain 2 43 IPR004330 -
Stsc704g00006 549 SMART 26again6 453 480 IPR006564 GO:0008270
Stsc704g00006 549 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 493 IPR031052 GO:0006355
Stsc704g00006 549 Pfam SWIM zinc finger 450 475 IPR007527 GO:0008270
Stsc704g00006 549 ProSiteProfiles Zinc finger SWIM-type profile. 445 478 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc704g00006 Stsc-Chr704 27280 30092 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc704g00006 MULE 1.9e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc704g00006 - - gmx:100778434 976.852