LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc704g00005	ATGCAAAGGAACCGCAAATCATCTCGTTGTGGTTGCCAAGCATACTTACGTATTGTAAAAAAGTCAGATTTTGATGTCCCTGAGTGGCGTGTTACTGGTTTTAACAATGTCCACAATCATGAGTTGTTAAAATCCAATGAGGTGCGTCTTATTCCAGCATATTGCACAATATCTCCCGATGACAAGAGCCGCATATGCATGTTTGCTAAGGCAGGAATGTCAGTGAGGCAAATGTTGAGATTGATGGAACTAGAGAAAGGCATTAAAGTAGGTTGCCTTCCTTTTACCGAAATGGATGTGAGAAACTTGTTGCAGTCTTTCAGAAATGTTGAGAGAGACAATGATGCCATTGATCTAGTTGCTATGTGCAAGCGATTAAAAGATGAAAATCAAAACTTCAAGTATGAATTCAAGTTAGACAGTAGTAACAGGCTGGAGCACATTGCGTGGTCTTACAGCTCATCTGTTCAGTCGTATGAGGCATTTGGAGATGCTGTGGTTTTCGACACCACCCACCGAGTAGATGCCTATGACATGCTGTTGGGAATTTGGCTTGGAGTGGACAATCATGGGATGACTTGTTTCTTTGGTTGTACACTTTTACGGGATGAAAATATGCAGTCTTTTTCGTGGGCTTTAAAGGCATTCATGGGCTTCATGAAAGGAAAAGCTCCGCAATCAATATTAACTGATCATAACATGTGGCTGAAAGAAGCTATTGCTGTTGACATGCCTGAAACAAAACATGCCTTTTGTATATGGCATATTCTTTCGAAGTTGTCTGACTGGTTTTCTGTTCTTCTTGGATCTCATTATGATGAATGGAAAGCTGACTTCCTCCAGCTCTACAATTTGGAACTGGTGGAAGATTTCGAAGAAGGTTGGAGGCAAATGGTTGATAAATATCAACTCCACACCAACAAACATATTATTAGCCTACATTCATTAAGGATGTTTTGGGCTCTACCATTCTTGAGGCGTTACTTCTTTGCAGGATTGACCAGCACAAGTCAATCTGAGTCCATTAATGCTTTCATCCAACGGTTCTTGAGTGCTCAATCTCAATTGGACCACTTTGTAGAGCAAGTCGGTGATATAACTTGTTTCCTTTAG	1113	0.407	MQRNRKSSRCGCQAYLRIVKKSDFDVPEWRVTGFNNVHNHELLKSNEVRLIPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKVGCLPFTEMDVRNLLQSFRNVERDNDAIDLVAMCKRLKDENQNFKYEFKLDSSNRLEHIAWSYSSSVQSYEAFGDAVVFDTTHRVDAYDMLLGIWLGVDNHGMTCFFGCTLLRDENMQSFSWALKAFMGFMKGKAPQSILTDHNMWLKEAIAVDMPETKHAFCIWHILSKLSDWFSVLLGSHYDEWKADFLQLYNLELVEDFEEGWRQMVDKYQLHTNKHIISLHSLRMFWALPFLRRYFFAGLTSTSQSESINAFIQRFLSAQSQLDHFVEQVGDITCFL	370

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc704g00005	370	Pfam	FAR1 DNA-binding domain	2	43	IPR004330	-
	Stsc704g00005	370	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	3	363	IPR031052	GO:0006355
	Stsc704g00005	370	Pfam	MULE transposase domain	166	258	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc704g00005	Stsc-Chr704	27280	30092	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Stsc704g00005		MULE	9.6e-21	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc704g00005	-		-	gmx:100775359	684.485