Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc704g00004 ATGGTGACTACATCAGAAAACCCTAGCTTTCAACATCATAACCCCTGTTCAGAGAGCAAAGGTTACTCTCCTTCATCCTCCTCATCTACAACACTAAAGCTCTTCGGTTTTCCCTTGACCACTCCCTCATCAAACTCCGAATCCATGGCTGATAATAAGAAGTTCAAATGCGATTTTTGTTACCGCGAATTCGCAAACTCACAAGCATTAGGTGGCCACCAAAACGCTCACAAGAAAGAGCGTCAAAGGGCCACCCTAGCGCGCTTTCGCCAACACTCTATTCCCTTTTATTTCTTTCCCTCGCCGTCCATTATTCCTTCGCATGAAAGCAGGGCCCTACACCGTGCGATTCCTGCGAAGAAACTCGATCACGACGACGAGGAAGATTTATTGATTCCCGTTGTTACTATGAGAACAAATGATGAGGAGCGTGATGGTGCAAGACAAGAAGGACCCTTCTTCATAGAAGAGGCACACAACAATAGCAGTGATGATGTTGATCTTAACTTGAGGCTATAG 519 0.4566 MVTTSENPSFQHHNPCSESKGYSPSSSSSTTLKLFGFPLTTPSSNSESMADNKKFKCDFCYREFANSQALGGHQNAHKKERQRATLARFRQHSIPFYFFPSPSIIPSHESRALHRAIPAKKLDHDDEEDLLIPVVTMRTNDEERDGARQEGPFFIEEAHNNSSDDVDLNLRL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc704g00004 172 Gene3D Classic Zinc Finger 26 94 - -
Stsc704g00004 172 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Stsc704g00004 172 SUPERFAMILY beta-beta-alpha zinc fingers 51 82 IPR036236 -
Stsc704g00004 172 PANTHER ZINC FINGER PROTEIN 5 22 102 IPR044299 GO:0010090
Stsc704g00004 172 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Stsc704g00004 172 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc704g00004 Stsc-Chr704 20377 20895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc704g00004 26 82 C2H2 Transcription Factor Family AT1G67030 49.254 3.38e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc704g00004 - - ahf:112740291 193.356