Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc703g00001 ATGCCACTTTCGCTTGCTGCTGCTGCTTCTTCTTCTTCTTCACCTATGGCTACTCGATATGATGTTTTCATCAGCTTCAGAGGTGAAGACACGCGTAACGGTTTCACCAGCCATCTTCATTCTGCTCTCCGCAGAAACCACATCGACACCTTCATAGATTATAGAATCCCGAAAGGAGGTGCCGTCTGGGACGACCTTGTTGACGCCATCAGAAACTCTAAGTTGATTCTTGTTATCTTCTCACAAAACTATGCTTCTTCAAAGTGGTGCTTGAGAGAGCTCGTAGAGATCATGAAATGCAAGAACAAGAACCAACAAGTTATTGTGATTCCAGTGTTCTACAAAATAGAACCCACACATGTTCGGAACCAGACTGGAAGTTACCGTACAGCATTTGGTGAGCATGAGAGATGTTTGAAGCGTAGCATTGTGGAGCAATGGAGGACTGCACTTTTTCAAGCTTCCAGTATTTCTGGTTTCCATTCCCATCATCACAGGCATGAAGCTGAGTTAATAGAAGAAATTGTGGAAGCAATCTTGCCAAAATTGAATGACAATTGCTACACAAATGAACTCAAAAGCCCTTTTGTCTGTGACCAGAATTACACCCGCATCGAATCTTTGTTGAAATCCAACTTTGAAAAGGTTCAAGTGATTGGAATATGGGGTATGGGTGGTATTGGTAAAACAACCATTGCTACCACTCTCTTTAACAAGTATTCTTCTAAATACCAAGGTTGCTGCTTCTTGACAAATTCAAGAGAGCTAGAAAGGCAAGATCTCAATCACATATGCAGTAAAATTCTTTCTCAAGCACTAAATCAAGATCTGCATATTGATAATCTTCAAGTGATACACTCCAGCATAATGCGTAAACTCAAGCATAATAGAGTTTTTCTTACACTTGATGATGTGATTAATTCATCACAAAATGTAGCTGATTTGGTTCGATTATTGCGTAATTGCCTGGGAGCAGGTAGTGTGGTCATGTTGGTAACAAGGGATAAAAGTGTTCTTACAGGTGCAGGGGTTGAACAAATTCATGAAGTTAAGGAGATGAATTATGGGGACTCCCTTAAACTTTTCAGCCATTATGCTTTTGATGGTTTGAGTCCTAAAGAAGGGTATCATGAACTATCTTTAAGAGCTCTAGAATATGCTAAAGGAGTACCATTAGCATTGAAAGTTTTGGGATCATTTCTCCGACCCAAGAGAGAATGTGAATGGGATAGTGCACTGAAGAAACTAAGAAAGTATCCAAATTCTGATATTCATCAAGTGTTGAAGCTGAGTTATGATGTATTGGATGATGATGAAAAGAACATCCTTTTAGACATTGCATGCTTTTTCTATGGGCAGGATATAGAAAAAGTAACAAGAATATTAAATTCTTGTGGTTTCTTTGCCAACATTGGGATAAGAAGCCTATTAGATAAGGCTCTTATAAGCATTACTTCAGATAATTGTATAAAAGTGCATGACTTAATACAGCAAATGTGTTGGAAAATGGTTCATGAAGAATCTTGCAAAAATGGTGGACAACAAACTAGATTGTGGAACATTGAAGATGTTTGCAATATGTTGCAAAATAACAGGGAGATTTATGCAATTGAAAGCATAATAGTGGATATGAATAAAATTGCAATAGATCCACGTATAATCACCATTGCATTCAGAAAGATGCCAAAGTTAAGGTTACTTGCTTTTGAAGGCAACATCAACATGAATCTCAAGTGTAGCGGCACTAATAATTGTGTGCTATCTTTAAGTGATTTTGAACTTCCTAATAACTTGAGGTATGTTCAGTGGAACAAATGCCAATTTGAATCTCTACAATCGATATGTTGGCCTCAGAAGCTTGTTGAACTTTCCATGCAAAATAGCAATGTCCAAAAACTCTGGGATAACATACAGAATCTCCCAAGTTTGGAGAAAATTGATCTTTCTATGTGTATAAACCTAACAGAGTGTCCAGATTTGACTGGTATCCTAAATCTTAAACATATAAAACTAGACAACTGCAAAAGTTTATCCTCTCTTCATCCATCCATTTTCTCTCTATCAAAGCTTAGAAAACTAGAATTGAACTTTTGCACAGCACTCAAGACCCTACGCAGTAACTATTATCCACCCTCATTGGACATCTTGTCAGCCATTGGTTGCTCAAATCTGGAAGAGTTCTCAATCCCAGTGGCAAGAGCTCAAGCTGCATTATATCTATCATCAACAGCTTTAACTGAAGTACCATCTAATGTTATGCATCTGAAAAATCTTGAGTACTTTGGTTTTAACATAAGTTACTCTCTTAACAAACTTCCTGAAAATTTTGCCCACACATTTGTGCTCATGGATCCCAAGAAACCCGAAGGCGACACGTGCATAGTCCTAAGCAAGATATTGCCAGCTCCTGCCTTCTTGTTTGTTAGGAAGTTATATTTCTGTGCATGCAAGAGCTTGGTTACACTACCAGACAACATTTGTGTGTTGCAATCATTGCAGATATTATTAGTGGAAAGGTGTCATATCATAAGTTTTCCAGAAAGCATTAAGGATCTTCAGCAACTAACAATTCTTGGAATTGTTGATTGTCAAATGCTTCAATCCATACCTCCACTTCCACCATCAGTAATGGTCTTCAGTGCAATAAACTGTAACTCTTTGGAGACAATCCATAATTGTTTGCACAGTGAGTCACTCAGAAAACAGAAGGTATTGTTTAGATTCCATAACTGCACAAAGTTGGATAAACAAGCCTATGAAGCTGTTTTGGTAGACCTTAATTTCATGACAGAATTTGGGGGAAAAAATGGATATCCAAATGTTAATGCTTACTACTACTTACCAAGTAAAGTGAGCATACTTAATGATTGGTTCCCTAATTTCTACTCTACACAACCATCTCTCACTGTTGAAGTTCCCAAGATTTCTTTTCCTGTTTTCTACTTGCTGCTTTCTAAACAGCAATCTTGCAACCTCAACAACAAACGTGTGATATTTGGATGTGAATGCTACTTGAGAAAAACTTCCAATGAATGGGAATGGATAGCAAGCTCTTACAATAACGAGAGTTTGACAAGTTATCATCAACCATTCAAAAAAATGGTTTCAGATCACATGCTGTTATGGTATGATTCAGAGTGTTGCAACAACATAATGAATGCAGTAATTCAAGAAAGAGAAAAGGGGAGCACTTGCAACTATCCTTGCCTTAAATTTGAGTTCTATGCTCAAACAGAGGATAGCGAGGAAGTTTTGTTTAAGGAGTGTGGGATTCATTGGATGCATGAAGATGTCAACGATGAAGGAGTGAGTCAAGATGGCATTGAAGGCTATGAATCTGATCATCAGCCACAACAGACAGAGAAACTCAGAACAAGTGCCTTTGAAATCACGTCCAACCTGGAGGCAGAAGATGAAATGAGTGATCATCAGGTAATAATGCTTTTCACACGTTCATGTATTCTTGTCAATTTTGGGAGAAGGTAG 3486 0.3795 MPLSLAAAASSSSSPMATRYDVFISFRGEDTRNGFTSHLHSALRRNHIDTFIDYRIPKGGAVWDDLVDAIRNSKLILVIFSQNYASSKWCLRELVEIMKCKNKNQQVIVIPVFYKIEPTHVRNQTGSYRTAFGEHERCLKRSIVEQWRTALFQASSISGFHSHHHRHEAELIEEIVEAILPKLNDNCYTNELKSPFVCDQNYTRIESLLKSNFEKVQVIGIWGMGGIGKTTIATTLFNKYSSKYQGCCFLTNSRELERQDLNHICSKILSQALNQDLHIDNLQVIHSSIMRKLKHNRVFLTLDDVINSSQNVADLVRLLRNCLGAGSVVMLVTRDKSVLTGAGVEQIHEVKEMNYGDSLKLFSHYAFDGLSPKEGYHELSLRALEYAKGVPLALKVLGSFLRPKRECEWDSALKKLRKYPNSDIHQVLKLSYDVLDDDEKNILLDIACFFYGQDIEKVTRILNSCGFFANIGIRSLLDKALISITSDNCIKVHDLIQQMCWKMVHEESCKNGGQQTRLWNIEDVCNMLQNNREIYAIESIIVDMNKIAIDPRIITIAFRKMPKLRLLAFEGNINMNLKCSGTNNCVLSLSDFELPNNLRYVQWNKCQFESLQSICWPQKLVELSMQNSNVQKLWDNIQNLPSLEKIDLSMCINLTECPDLTGILNLKHIKLDNCKSLSSLHPSIFSLSKLRKLELNFCTALKTLRSNYYPPSLDILSAIGCSNLEEFSIPVARAQAALYLSSTALTEVPSNVMHLKNLEYFGFNISYSLNKLPENFAHTFVLMDPKKPEGDTCIVLSKILPAPAFLFVRKLYFCACKSLVTLPDNICVLQSLQILLVERCHIISFPESIKDLQQLTILGIVDCQMLQSIPPLPPSVMVFSAINCNSLETIHNCLHSESLRKQKVLFRFHNCTKLDKQAYEAVLVDLNFMTEFGGKNGYPNVNAYYYLPSKVSILNDWFPNFYSTQPSLTVEVPKISFPVFYLLLSKQQSCNLNNKRVIFGCECYLRKTSNEWEWIASSYNNESLTSYHQPFKKMVSDHMLLWYDSECCNNIMNAVIQEREKGSTCNYPCLKFEFYAQTEDSEEVLFKECGIHWMHEDVNDEGVSQDGIEGYESDHQPQQTEKLRTSAFEITSNLEAEDEMSDHQVIMLFTRSCILVNFGRR 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc703g00001 1161 PRINTS Disease resistance protein signature 218 233 - -
Stsc703g00001 1161 PRINTS Disease resistance protein signature 292 306 - -
Stsc703g00001 1161 PRINTS Disease resistance protein signature 638 654 - -
Stsc703g00001 1161 PRINTS Disease resistance protein signature 387 401 - -
Stsc703g00001 1161 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 160 IPR035897 -
Stsc703g00001 1161 SUPERFAMILY L domain-like 491 891 - -
Stsc703g00001 1161 Gene3D - 353 436 IPR042197 -
Stsc703g00001 1161 Pfam TIR domain 20 186 IPR000157 GO:0007165
Stsc703g00001 1161 Gene3D - 187 347 IPR027417 -
Stsc703g00001 1161 ProSiteProfiles TIR domain profile. 18 183 IPR000157 GO:0007165
Stsc703g00001 1161 Gene3D Ribonuclease Inhibitor 790 922 IPR032675 -
Stsc703g00001 1161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 764 IPR044974 GO:0006952
Stsc703g00001 1161 Pfam Leucine Rich Repeat 619 635 IPR011713 -
Stsc703g00001 1161 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 185 - -
Stsc703g00001 1161 Gene3D - 17 186 IPR035897 -
Stsc703g00001 1161 Pfam NB-ARC domain 206 432 IPR002182 GO:0043531
Stsc703g00001 1161 Gene3D Ribonuclease Inhibitor 482 783 IPR032675 -
Stsc703g00001 1161 SMART till_3 19 157 IPR000157 GO:0007165
Stsc703g00001 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc703g00001 Stsc-Chr703 7325 14949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc703g00001 20 864 WRKY Transcription Factor Family AT4G12020 30.081 2.99e-81 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc703g00001 - - aip:107614877 1344.33