Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc700g00002 | ATGGCAGTGGTAATCGTAGGTGCTGGAACTTCAGGTTTAGCTGTTGCAGCATGCTTAACACAAAAATCAGTACCATTCATCCTCCTCGAAAGAGAAGATTGTTTTGCTTCCTTATGGCAAAAATACACCTATGACCGTCTCCACCTTCACCTTGGAAAAAACGTGTGCGACCTTCCCCATCTTCCGTTACCTCATTCCTATCCCCGCTATGTTCCTAAGGAGCTCTTCATAGAGTATTTACACACCTACGTGAAGCATTTCAACATCAAGCCTTTGTACCATAGATCCGTGGAGCTTGCGGAGTTCGATGAGGTGGATCGGAAGTGGAAGGTGAAGGCTAAGAATACAGCCTCCGGCGAGGTTGAGGAGTATTCTGGAAGGTTCTTGGTGGTGGCTAGCGGGGAGACCGCGGAGCCACGTGTCCCTAAGGTTGAAGGTTTGGAGAGTTTCAAAGGGAAAGTGATGCATTCCACAGGTTACAAGAATGGTAAGGAGTTCAATGCTGATGAGCATGTTCTTGTTGTTGGATCTGGTAATTCTGGGATGGAGATCGCTCTAGATTTGTCCAATTTCGGTGCCAAACCTTCCATTATTGTTCGAAGCCCGGTTCATATTGTATCAAGGGATATGATGTATTATTCAGAGATGTTGTTGAAGTATCTATCGTTTAGCACGGTGGAGAAGCTACTTGTTATGGTGAGTAGGATTGTGTATGGGGATCTGAGCAAGTATGGGTTACCTTGGCCAACTGAGGGACCTTTCACCATGAAAATCAAGTATGGCAAGTTCAGTATCATTGACTTGGGAACTGTCAATAAAATCAGGAACGGAGAGATACAGGTGTTATCAGCAGAAATAGATAAAATAAGAGGTAATGAAGTGTTGTTTAGGGATGGCAAGTGTCACTCATTTGATTCAATCATATTCTGCACTGGCTTCAATAGATCAACACAAAAGTGGCTTAAGGGGGGTGATGATCTTCTGAATGAGGATGGTTTTGCCAAGGCAAGTAATTTTCCAAATCACTGGAAGGGTAAGAACAATTTGTATTGCGTTGGGCTTGCACAGAGAGGATTCGCTGGAGCTAAAAGTGAAGCTCAAAATGCTGGCGTTTATGATGAATACATTACCGTTGACAAGAAGTTCAAGAACTTGTTTATCTATGGTGATGGAAACACAAAAACCATCATCACTGGCCGCAAGAACTTCCATGAGGGTACTAAAACAATGAGAACCGCCACATTATCCTCCAATGCTGATGATTTCCTTGCCAAGTCAATTGCATTCGAGAACACCGCCGGTGCTGAAGGTCACCAAGCAGTGGCTCTCCGCATCCAAGGTGACCGCTCAGCCTTCTTTGATTGCGCCATGCGTGGTTACCAAGACACACTGTATGCCCATGCTCATCGTCAGTTCTACCGCAACTGTGAAATCTCCGGTACCATTGACTTCATCTTCGGCTATGGCACCACCTTGATCCAAAACTCTAGGATCATCGTGAGGAAGCCTATGTCAAACCAACAAAACATTGTTGTTGCTGACGGAACTGACCAGAAGAACATGCCTACCGGTATTGTCCTTCAAAATTGTGAGATCATGGCTGAACCCGCCCTCTACCCTGACAGGTTAACAGTGAGGACATTCTTGGCAAGACCATGGAAGGCATTCTCAAGGGCAGTGTTTATTGAGAACAACATTGGTGACTTGATCCAGCCACAAGGTTACATCCCATGGAACCCACCAACTGAGGCTAACACTGACCATTGTTACTTTGTTGAGTTTGGAAACACTGGTGCTGGTGCCAATGCCCAAGCCAGAGCCAAATTTGCAAAGGGACTAATTAGCAAGGATGAAGCTGCTAAATATCTTGCTGAGCCATGGATCCAAGCTAGCACTTGGGTCCCAGCTACTGGCATTTCTTATGATGCTGGCTTCATCAAGGCTTAA | 1947 | 0.453 | MAVVIVGAGTSGLAVAACLTQKSVPFILLEREDCFASLWQKYTYDRLHLHLGKNVCDLPHLPLPHSYPRYVPKELFIEYLHTYVKHFNIKPLYHRSVELAEFDEVDRKWKVKAKNTASGEVEEYSGRFLVVASGETAEPRVPKVEGLESFKGKVMHSTGYKNGKEFNADEHVLVVGSGNSGMEIALDLSNFGAKPSIIVRSPVHIVSRDMMYYSEMLLKYLSFSTVEKLLVMVSRIVYGDLSKYGLPWPTEGPFTMKIKYGKFSIIDLGTVNKIRNGEIQVLSAEIDKIRGNEVLFRDGKCHSFDSIIFCTGFNRSTQKWLKGGDDLLNEDGFAKASNFPNHWKGKNNLYCVGLAQRGFAGAKSEAQNAGVYDEYITVDKKFKNLFIYGDGNTKTIITGRKNFHEGTKTMRTATLSSNADDFLAKSIAFENTAGAEGHQAVALRIQGDRSAFFDCAMRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYGTTLIQNSRIIVRKPMSNQQNIVVADGTDQKNMPTGIVLQNCEIMAEPALYPDRLTVRTFLARPWKAFSRAVFIENNIGDLIQPQGYIPWNPPTEANTDHCYFVEFGNTGAGANAQARAKFAKGLISKDEAAKYLAEPWIQASTWVPATGISYDAGFIKA | 648 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc700g00002 | 648 | Pfam | Flavin-binding monooxygenase-like | 3 | 315 | IPR020946 | GO:0004499|GO:0050660|GO:0050661 | |
Stsc700g00002 | 648 | FunFam | Pectinesterase 4 | 366 | 645 | - | - | |
Stsc700g00002 | 648 | SUPERFAMILY | FAD/NAD(P)-binding domain | 3 | 220 | IPR036188 | - | |
Stsc700g00002 | 648 | ProSitePatterns | Pectinesterase signature 2. | 478 | 487 | IPR033131 | - | |
Stsc700g00002 | 648 | Pfam | Pectinesterase | 369 | 630 | IPR000070 | GO:0030599|GO:0042545 | |
Stsc700g00002 | 648 | Gene3D | - | 1 | 369 | IPR036188 | - | |
Stsc700g00002 | 648 | SUPERFAMILY | FAD/NAD(P)-binding domain | 169 | 353 | IPR036188 | - | |
Stsc700g00002 | 648 | Gene3D | - | 370 | 645 | IPR012334 | - | |
Stsc700g00002 | 648 | PANTHER | FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) | 3 | 429 | - | - | |
Stsc700g00002 | 648 | SUPERFAMILY | Pectin lyase-like | 369 | 643 | IPR011050 | - | |
Stsc700g00002 | 648 | PRINTS | Flavin-containing monooxygenase (FMO) signature | 1 | 14 | IPR000960 | GO:0050660|GO:0050661 | |
Stsc700g00002 | 648 | PRINTS | Flavin-containing monooxygenase (FMO) signature | 183 | 198 | IPR000960 | GO:0050660|GO:0050661 | |
Stsc700g00002 | 648 | PRINTS | Flavin-containing monooxygenase (FMO) signature | 155 | 169 | IPR000960 | GO:0050660|GO:0050661 | |
Stsc700g00002 | 648 | PRINTS | Flavin-containing monooxygenase (FMO) signature | 68 | 83 | IPR000960 | GO:0050660|GO:0050661 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc700g00002 | Stsc-Chr700 | 10199 | 16227 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc700g00002 | 370 | 645 | Carbohydrate Esterase | AT5G49180 | 45.520 | 2.66e-80 | 263 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc700g00002 | K11816 | - | gmx:100777958 | 570.852 |