Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc6g00039 ATGGCCTCCACTCCACTCCACTCCTCTGAATGTGCTCATTCGGGTGGTGCTCCGTCCATTGCGATGTCTCTATGCTCTTGCTCCATTGCGCTGTCTTACTGTTTTCGTTTTGTCGTCGTCCGCTCTTGCTCCACCGCCAGCTCCGTGCCTCTTTATCTCCACTTTCTTCGTTCGTGTCTCGTTTCCTGTTTTCTTTTGTACAACTTCGCCGCCACTTCAACTCCATCCCTGCAACTCTGCTGCGTCTGCAGCCTCACCTCGGCGACCCCATCTGATTTCTTCTCACTTTGGCTTTCACTTTCTGCGCAGTTTTCTTGTGATGTTGATGAGATGTATGTTCCAAAGGTTGACATGTTTTTCGAGTCACTTGAGAAAGCTAGAGATTTCTACAAGGATTATGCTAAACGGGCAGGGTTTGCTATAAAGATTAGGAACACAAATAAGAGCAAGAAATCAAATGAAATATTGAACCAGTTGCTGTCATGTAATAGAGAAGGGAAAAGAAGGTCGGATTTGCTAGTTTCTGAGAAGACAAATGCAGT 542 0.4594 MASTPLHSSECAHSGGAPSIAMSLCSCSIALSYCFRFVVVRSCSTASSVPLYLHFLRSCLVSCFLLYNFAATSTPSLQLCCVCSLTSATPSDFFSLWLSLSAQFSCDVDEMYVPKVDMFFESLEKARDFYKDYAKRAGFAIKIRNTNKSKKSNEILNQLLSCNREGKRRSDLLVSEKTNAV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc6g00039 181 Pfam FAR1 DNA-binding domain 128 171 IPR004330 -
Stsc6g00039 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 105 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc6g00039 Stsc-Chr6 361925 363299 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc6g00039 FAR1 4.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc6g00039 - - aip:110271906 84.7297