Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc699g00005 ATGGACATTGACGAATGTAAGATAGGGAACCATACATGCATAAGTGAGCAAAATTGTCTCAACACAATTGGGTCATTTGAATGCTTTTGTCCTAAGGGGCAATCTGGAAATGGAACAAAGGAAACAGGGTGCCAAAAGCCGAATGAAGTGAACAAATTTGTACTTAGTGCTAGCGGAGGATTTATTACATTCTTTGTGGGGTCTTCCTCGTTATACTTGATATTCAAGAAAAGGAATCTTAAGAAAATGAAAGAGAATTTTTTTAAACAAAATGGTGGCATATTTTTGCTACAACAACTCTCGGCAGCAAGAAAGGAATCTCCACAAACTGCTCAGATTTTCACAGCAAATGAATTAAAGAAGGCCACCAACAACTATGATGAGAACTTAATCATTGGCAAAGGAGGCTTTGGTATTGTTTTCAAAGGATTTCTACCTGATAATAGAACTATCGCCGTTAAGAAGTCAAAAATAGTTGATCAAAGTCAAATAGAACAATTCATTAATGAGGTGGTTGTTTTATCCCAAATCAATCATAGAAATGTGGTGAAACTTTTAGGTTGTTGTCTAGAGACAGAAGTTCCTTTATTAGTTTACGAATTCATTAATAATGGTACCTTATTTGATGCTATACACAATGGAGACCAGGCAAATGGCTTAACTTGGAAAAATCGACTAAGGATCGCAGCAGAAGCAGCCGGAGCTCTATCGTATTTGCACTCAGCTGCCTCCATACCCATTGTCCACAGGGATGTGAAGAGTTCTAATATTCTCTTAGATGAATCGTACACTGCGAAAGTTTCCGATTTCGGAGCTTCAAGATTGGTTCCTCTAGATCAAACTGCCTTAGCTACTATGGTACAAGGAACAATTGGATACTTAGACCCAGAGTACATGCAAACAAGCCGATTGACCGAGAAAAGTGATGTATATAGCTTCGGTGTGGTGCTTTTAGAGCTTCTGACAGGTGAGAAACCTCTTTCTTTTGACAGGTCAGAAGAGGAAAGGAGTCTTGCAATATATTTTATATCTTGTTTGAAGGAGGATCGCTTGTTTGATATTATTCAAGATGACATCGTTTTGAATGAGGAAAATAAGCAAGAGATCATGGAGGTTGCCATTCTTGCAAGGAAGTGCTTAAGACTTATTGGGGAAGAGAGACCGAGCATGAAGAAAGTGGCAATGGAATTGGAGAGAATAAGGCTAATGCATAAGCACCATGGATTTAATGGAGGGAAAAGTTTAGAAGAGACACATCAATGCTTTCTTTCAAAGTCATCATCCAAAATATATGAAAATAAGTATGGTCACAGTACTCATCAAATTATAGGCTGCGATAGCATTTGGAATCAATTACTAGTTGATATTGGTAAAGGAAGATGA 1383 0.3782 MDIDECKIGNHTCISEQNCLNTIGSFECFCPKGQSGNGTKETGCQKPNEVNKFVLSASGGFITFFVGSSSLYLIFKKRNLKKMKENFFKQNGGIFLLQQLSAARKESPQTAQIFTANELKKATNNYDENLIIGKGGFGIVFKGFLPDNRTIAVKKSKIVDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFINNGTLFDAIHNGDQANGLTWKNRLRIAAEAAGALSYLHSAASIPIVHRDVKSSNILLDESYTAKVSDFGASRLVPLDQTALATMVQGTIGYLDPEYMQTSRLTEKSDVYSFGVVLLELLTGEKPLSFDRSEEERSLAIYFISCLKEDRLFDIIQDDIVLNEENKQEIMEVAILARKCLRLIGEERPSMKKVAMELERIRLMHKHHGFNGGKSLEETHQCFLSKSSSKIYENKYGHSTHQIIGCDSIWNQLLVDIGKGR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc699g00005 460 FunFam Wall-associated receptor kinase 2 202 420 - -
Stsc699g00005 460 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Stsc699g00005 460 SUPERFAMILY EGF/Laminin 2 37 - -
Stsc699g00005 460 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 409 IPR045274 GO:0007166
Stsc699g00005 460 ProSitePatterns Calcium-binding EGF-like domain signature. 2 28 IPR018097 GO:0005509
Stsc699g00005 460 CDD EGF_CA 2 36 - -
Stsc699g00005 460 Gene3D Transferase(Phosphotransferase) domain 1 202 416 - -
Stsc699g00005 460 SMART egfca_6 2 45 IPR001881 GO:0005509
Stsc699g00005 460 SMART serkin_6 126 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc699g00005 460 Pfam Calcium-binding EGF domain 2 44 IPR001881 GO:0005509
Stsc699g00005 460 Gene3D Laminin 2 44 - -
Stsc699g00005 460 Pfam Protein kinase domain 128 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc699g00005 460 CDD STKc_IRAK 132 400 - -
Stsc699g00005 460 FunFam Wall-associated receptor kinase 2 96 201 - -
Stsc699g00005 460 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 19 30 IPR000152 -
Stsc699g00005 460 Gene3D Phosphorylase Kinase; domain 1 94 201 - -
Stsc699g00005 460 SUPERFAMILY Protein kinase-like (PK-like) 108 398 IPR011009 -
Stsc699g00005 460 FunFam Wall-associated receptor kinase 2 3 44 - -
Stsc699g00005 460 ProSiteProfiles Protein kinase domain profile. 126 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc699g00005 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Stsc699g00005 460 ProSiteProfiles EGF-like domain profile. 2 45 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc699g00005 Stsc-Chr699 21814 24494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc699g00005 2 460 Receptor kinase-like Gene Family AT1G21230 51.613 2.30e-153 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc699g00005 Pkinase 6.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc699g00005 - - gsj:114381577 619.772