Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc691g00003 ATGGTAACAATCATAGAATCCCATATAGTCACCCCTAAAGAAGAAACTCCAAAGGGTCATTTTTTCTGCTTATCAGAGACTGACCAAATCTGTCGTCCGGATCATACACCCTCAATCTACATTTACAACAACAACAATGTGAATGTGAATGTCCTTGTTCAAAGAATGAGAGACTCCCTTGCTGAGATTTTGGTTCACTACTATCCATTATGTGGGCGGTTGAATTGGATAGAAGGTGGCCGTTTGAAACTGGATTGTAATGCAAAGGGAGCCATGCTGCTTGAAGCTGAATCCAAGAAAACAATGGCTGAATATGGAGACTTCTCACCAAATGATGATGCCACCAAAGAACTCATACCAAACCTTGATTACTCTCAACCCATTGAGGACCTTCCTTTGTTTCTGGCACAAGTCACAAAGTTCCATGGTGGCAATGGCATTGCCATTGGAGTTGCCATGTCTCATCCAATGTGTGATGGGATTTCAGCTCTTCACTTCGTCTACTCATGGGCCAAACTCACCCGGGGAGACTCATTGCACCCAGATGAATTGCCATTTCTTGATCGGACGGTGTTCACAGCCTCTCGGCTGCCGGCGTCGCGGCGTTTCGACCACCCAGAGTTTAAGCTTCCACCACTCATCCTGGGAAGAACAGACAACATTGAAGAACGAAAGAAGAAGACAATGTTTGCATTGTTGAAGCTCACAGCAGAACAGGCGCAGAAATTGAAGCAGAATGCCAATATTGATCATTCTTATGAATCTAAGCAGAGACCCTACAGCAGATTTGAAGCCATTGGAGCATATATTTGGCGATGTGCTTGTAAGGCCCATGGGCTTGACAAAGAGCAACCAACCAGAGCAAGGACAATGGTTAATATTCGTAACAAGGTGAATCCTCCTTTACCGAAAAACTATTTTGGGAATGGTTTGGCAAGGACAGTGACAGAAACATGTTACGCCGGAGAAATCACATCAAAGCCGCTAAGCTATGGTGCACAAAAGATAAGAGAAGCTGTGGAAATTGGTGGGAATGAAGAGTACATAAGATCGCAACTGGAGTTTCTAGCGCAACAAGAGACAATGGATATGATTAGGAATAAGTACATGGGAAAAGGAGAGCATGGAAAACCTGATGTTTCTTTCTATGGAAACCCCAACATTATGCTTGGAAGCTGGTTGAGTATGCCAATGTATGAAGTAGATTTTGGTTTGGGAAAACCAGATTATTTTGGTCCAGGTGCTGTTTATCCCTTAGATTATGGGATTATGGCTCCAAGCCCACATGGGGATGGATCCATTGTTATCTTCATGAATTTTCAAGTGCATGACATGCAGAATTTCATCAACATCTTTTGGGATAATTTATGA 1371 0.4311 MVTIIESHIVTPKEETPKGHFFCLSETDQICRPDHTPSIYIYNNNNVNVNVLVQRMRDSLAEILVHYYPLCGRLNWIEGGRLKLDCNAKGAMLLEAESKKTMAEYGDFSPNDDATKELIPNLDYSQPIEDLPLFLAQVTKFHGGNGIAIGVAMSHPMCDGISALHFVYSWAKLTRGDSLHPDELPFLDRTVFTASRLPASRRFDHPEFKLPPLILGRTDNIEERKKKTMFALLKLTAEQAQKLKQNANIDHSYESKQRPYSRFEAIGAYIWRCACKAHGLDKEQPTRARTMVNIRNKVNPPLPKNYFGNGLARTVTETCYAGEITSKPLSYGAQKIREAVEIGGNEEYIRSQLEFLAQQETMDMIRNKYMGKGEHGKPDVSFYGNPNIMLGSWLSMPMYEVDFGLGKPDYFGPGAVYPLDYGIMAPSPHGDGSIVIFMNFQVHDMQNFINIFWDNL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc691g00003 456 Pfam Transferase family 1 448 - -
Stsc691g00003 456 Gene3D - 217 454 IPR023213 -
Stsc691g00003 456 Gene3D - 1 210 IPR023213 -
Stsc691g00003 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc691g00003 Stsc-Chr691 4145 5841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc691g00003 2 448 Monolignol Biosynthesis Gene Families AT5G48930 32.886 8.85e-78 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc691g00003 K13065 - gmx:100779814 470.314