Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc68911g00001 ATGGTGGATGGATCTGGTCTAAAACAATTTGTGACTGCTTTAGCCGATATGGCTCAAGGTGCTCATCAACCGTCCATCCAACCTATATGGCAAAGAGAGCTCCTATGTGCAAGAAACCCACCACAAATCTCATGCATCCATCGCGAATATGATCAACTACCAATCAATAACAAACAAGGGAGTGAAGGGACCGCCATTTCTTCGTACGAGAACGACATGGTTCAACGCTCCTTCTTCTTTGGACCAACCGAAATAGCTTCCCTTCGCCGTCTGGTTCCACCTCACCATGGCCACTGCACTCGATTTGAACTTATAACTGCATGTCTATGGTGCTGCCGTACAAAAGCATTGCAACTTGCACCAGAACATGAAGTTCGCATGATGTGCATCGTGAATGCACGCGCCAGGTTTAACCCTAACATACCAGTTGGTTATTACGGAAAC 444 0.4662 MVDGSGLKQFVTALADMAQGAHQPSIQPIWQRELLCARNPPQISCIHREYDQLPINNKQGSEGTAISSYENDMVQRSFFFGPTEIASLRRLVPPHHGHCTRFELITACLWCCRTKALQLAPEHEVRMMCIVNARARFNPNIPVGYYGN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc68911g00001 148 Gene3D - 1 52 IPR023213 -
Stsc68911g00001 148 Gene3D - 55 148 IPR023213 -
Stsc68911g00001 148 Pfam Transferase family 1 148 - -
Stsc68911g00001 148 PANTHER ACYL TRANSFERASE 4 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc68911g00001 Stsc-Chr68911 15 458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc68911g00001 3 148 Monolignol Biosynthesis Gene Families AT5G48930 27.273 3.73e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc68911g00001 K19861 - gmx:100792864 194.897