Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc68505g00001 ATGGATGTGAATCGGGAATACTATGAAATTGGGTTGCCCATAATTGAAAAAGCAGGAGTGGCTCACAAGATTGATTTTAGAGAAGGACCTGCTCTTTCTTTTCTTGATGAACTCCTTAAAGATGAAAATAACATGGGGACTTATGATTTTGTTTTCGTGGACGCTGATAAGAACAACTACTTGAACTACCATAAGAGGGTGATTGAGCTTGTGAGGGTTGGAGGGTTGATCGGCTACGATAACACTCTATGGTTTGGATCTGTAGCTCTGCCATCTGATGCTCCAATGATGGATTTTGTGAAGAAGTCTCGCGGTTATGTGATGGATTTCAACAAGCACCTTGCTAGTGATCCAAGAATTGAGATTTGTCAAATTCCCGTTGGAGATGGCATTACGTTGTGCCGTCGCATCCTCTGA 417 0.4221 MDVNREYYEIGLPIIEKAGVAHKIDFREGPALSFLDELLKDENNMGTYDFVFVDADKNNYLNYHKRVIELVRVGGLIGYDNTLWFGSVALPSDAPMMDFVKKSRGYVMDFNKHLASDPRIEICQIPVGDGITLCRRIL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc68505g00001 138 PANTHER O-METHYLTRANSFERASE-RELATED 1 137 - -
Stsc68505g00001 138 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 136 IPR029063 -
Stsc68505g00001 138 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 137 IPR002935 GO:0008171
Stsc68505g00001 138 Pfam O-methyltransferase 1 137 IPR002935 GO:0008171
Stsc68505g00001 138 Gene3D Vaccinia Virus protein VP39 1 138 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc68505g00001 Stsc-Chr68505 37 707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc68505g00001 1 137 Monolignol Biosynthesis Gene Families AT4G34050 72.993 3.12e-74 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc68505g00001 K00588 - gmx:100305498 238.424