Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc683g00002 ATGGAGAACACTGAGATGGAAGGCATTATTATCAAATGGGAAGAAAATGATGTGGTTGGAGACACAAAAGGGAACAAGCAATTGATTGAGCTTAATTCTTCTTGTCCCCAATTTCCCAAGGCTACTAGTAGTAGCTATCTAGCTCCTAATAAGAATGTTTGCAATAATCCTTCTGATATGAGGAACCCTAGCAACGGTTCAGATGATCAGCTACTCCATTTTGCTGAATTCATTTTAGGACCTAAGTTTGATCCAAACATGGATCCTAAGAAAATCAACAAAATGATATCAAATAGGCTCTCTGCACAGAGATCCAGACATAGAAAAATGCGATATCTACTCAATTTAGAAGAGCAAGCTAAAACTTTTCAGGAGAAAGTGACAGCTCTCCGTACAGAAATTACATCATACACAAATCAGAAACAGCTTTTGATGTCGGAGCAAGCGACGTTGCGACAGAAATTGGAAGCCATTGAGAAAGAAAAATCACTTAGGAATGCTGAAACCGAAAAGAGGAATGCGGAATTGAAGATTCTGAAGGAACTCAAAATGAAGAAGGAGTTGGAAGAACTATTTGGAGTACCAATTTTCAATTATGATGCTATTCCACATCCACTAGAATCTTGTTACACCAACCCAGGTCAAGATCAACTTGCAGAGAAGAATAATGGTGAGGAAACTTCATCAGAAATAATGAAGCTGGAAATGGCACCAATAAATCATGAAGTGGTGTTACATTATGCTAATAATATGGATTTCCTAGCACCCAACAACATGACCCTGCCCAATTATCCTGCTGTGGGGTTTGGGAGGCACCACCTTAGGCAGTGCCACAGGGGATGGGTACGGCACTGGCTAGCTTTTTTTGTGCCAGTGCCGTCGGGTCAGGGTGAGTTATCACCCAGGGCAGTGCCGCTGCACAAGGGGGTGGCACTGGTTCATCCTCAATGCCTCATTCTTAGGGTGAGGCACTGGTGCACCTGCAGTGCCTCTAGCTAA 999 0.4254 MENTEMEGIIIKWEENDVVGDTKGNKQLIELNSSCPQFPKATSSSYLAPNKNVCNNPSDMRNPSNGSDDQLLHFAEFILGPKFDPNMDPKKINKMISNRLSAQRSRHRKMRYLLNLEEQAKTFQEKVTALRTEITSYTNQKQLLMSEQATLRQKLEAIEKEKSLRNAETEKRNAELKILKELKMKKELEELFGVPIFNYDAIPHPLESCYTNPGQDQLAEKNNGEETSSEIMKLEMAPINHEVVLHYANNMDFLAPNNMTLPNYPAVGFGRHHLRQCHRGWVRHWLAFFVPVPSGQGELSPRAVPLHKGVALVHPQCLILRVRHWCTCSASS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc683g00002 332 Pfam bZIP transcription factor 90 145 IPR004827 GO:0003700|GO:0006355
Stsc683g00002 332 Coils Coil 113 133 - -
Stsc683g00002 332 PANTHER BASIC LEUCINE ZIPPER 34 70 186 - -
Stsc683g00002 332 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Stsc683g00002 332 SUPERFAMILY Leucine zipper domain 90 145 IPR046347 GO:0003700|GO:0006355
Stsc683g00002 332 CDD bZIP_plant_RF2 91 142 IPR044759 GO:0003700|GO:0006355
Stsc683g00002 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 108 IPR004827 GO:0003700|GO:0006355
Stsc683g00002 332 Coils Coil 141 191 - -
Stsc683g00002 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 151 IPR004827 GO:0003700|GO:0006355
Stsc683g00002 332 Gene3D - 88 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc683g00002 Stsc-Chr683 8601 13793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc683g00002 88 180 bZIP Transcription Factor Family AT2G21230 36.559 2.45e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc683g00002 bZIP_1 5.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc683g00002 - - adu:107458287 298.13