Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc67g00017 ATGACGTATGCAGAAGTTATAACCTACCTGACGTACTCTCATGGGAAGTTAGAAGAAGTAATTTTTCACGTAGGTTTTGATGATGTTGACGCCGTAAAAAACAAGGTGTCTTATGCTAAGAAAAAGAACTTACTTGGTTATGCTGTGTGGGAACTCTGCTATGATGACAATTGGGTGCTTTCTACTGCAGTAGCTCAGCAGGGTTTAAGTGACCATGATGGTGGGCAGTATAGTGGGCGATTGGTGATCATTTTAATAGCAACTGTCTTATGTGCTCTTCTATTGGGAGTTATGATTTACTACTTCTGCAAGAGGCTCTTTGAATCAAAGGGTCTGAAAAAGGTAGATATAGATGCAGGGGATTTTCATGGCAGTGTTCCTAATATCCGAGTCTTCAGCCTTTCGGACATTAAGTTGGCCACTAAGAGATTTTCAATTGAAAATAAGCTTGGTCAGGGAGTTCTACGAGATGGTAAGGAAATAGCAGTGAAAATGTTAGCAAAAACTTCTACACAAGGTTTTGAAGAGTTCAAAAATGAGATAACACTTACTGCAAGACTACAACACGTGAATCTTGTTAGCTTATTGGGTTTCTACATTGATAAGGAAGAACATATGTTGATCTACGAGCTTATGATATGTGGAAAGAAGGAAGATGCATGGAGTTTGTGGATCCTTTACTTGACGACGCAGGCTCATCATGTAAAGTACTTAGGTGTATGCAGATAG 729 0.3937 MTYAEVITYLTYSHGKLEEVIFHVGFDDVDAVKNKVSYAKKKNLLGYAVWELCYDDNWVLSTAVAQQGLSDHDGGQYSGRLVIILIATVLCALLLGVMIYYFCKRLFESKGLKKVDIDAGDFHGSVPNIRVFSLSDIKLATKRFSIENKLGQGVLRDGKEIAVKMLAKTSTQGFEEFKNEITLTARLQHVNLVSLLGFYIDKEEHMLIYELMICGKKEDAWSLWILYLTTQAHHVKYLGVCR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc67g00017 242 Gene3D Glycosidases 2 78 - -
Stsc67g00017 242 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 71 IPR001223 GO:0005975
Stsc67g00017 242 Pfam Protein tyrosine and serine/threonine kinase 158 216 IPR001245 GO:0004672|GO:0006468
Stsc67g00017 242 SUPERFAMILY (Trans)glycosidases 25 64 IPR017853 -
Stsc67g00017 242 Gene3D Phosphorylase Kinase; domain 1 121 211 - -
Stsc67g00017 242 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 63 213 - -
Stsc67g00017 242 SUPERFAMILY Protein kinase-like (PK-like) 124 215 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc67g00017 Stsc-Chr67 134989 138778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc67g00017 78 212 Receptor kinase-like Gene Family AT4G23230 41.497 1.61e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Stsc67g00017 PK_Tyr_Ser-Thr 6.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc67g00017 - - twl:119992692 209.534