Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc67g00014 ATGGGGAAGGCAGGGAAATGGCTTAGAAACTTCTTGACAGGGAAGAAAGAAAGGGAAAAGGAGAAGGTGAAGGACAAATGTGGTGGTGGTAGTAGTGCTACAAACCTGAATTCTTCAAATGGAACAGAAAATCCAACCACTCCAAATTCCACAACCCCAAAGGAGAAAAGGAGATGGAGCTTTAGAAGATCATCTGCCACAAACACATCCACACCAACAACACCTTCCAAGGAATTGAACTTTGCAGAACCAAATGTCACTGCTTCACAGACACCACAAGCTGCTGCCAGCACAGATATTCCTCTGGATGATGAGCAGAAGAAGCATGCCATGGCAGTGGCTGCTGCCACGGCAGCAGCAGCAGACGCGGCAGTGGCCGCAGCTCAGGCTGCGGCTGCTGTGATCCGTTTGACTTCTGGTTCCAATGGAACAGCAGCAGAAGAGGCTGCAGCCATTAAAATTCAATCTGTCTTTAGGTCCTACTTGGCAAGAAAAGCATTGTGTGCTCTGAGAGGATTAGTGAAGCTGCAGGCACTGGTAAGGGGTCACTTGGTGAGAAAACAGGCCAAGGCCACACTGAGATGCATGCAGGCTTTGGTGACAGCACAGGCTAGAGCTCGTGCTCAGAGGATCCGAGTTGCATCATCAGAGGGAAAGCTTTATCAGAAGCAATCAAGTTTTAGAAACACTACAGAGGAAGATTTATACGCTCAAGTGTATAATGAAATGGAGAGAGGGATGGAAGAGAACATCAAGATTGTGGAGATGGATGTTTGTGAATTAAAAGGAAACAGTAGAAGCAGAAGCAGCAGTGTGCATAGATTTCCAGCATATTATTCAAAGGAAGAAAACCTGAAGGTATCACCAGCTCCATCAGCTTTAACAGAGTTTAGTCCAAGAGCATGCAGTGGACATTTTGAGGACTGCTTCAGCACAGCACAGAGCAGCCCTCAATGCTACTCCTCGGCGTCTCAAATAGACGATTTGAAGCATCCCTTCTCCTTCCATAGGGCAGGCTATGCAGAGGCCATGTCCTATGACTACCCTTTGTTTCCAAATTACATGGCCAACACAGAATCATCAAGGGCCAAAGTGAGATCACACAGTGCACCAAAGCAAAGGCCTGATTCATTCGAGAGGCAGCCTAGCCGGCGAAGAGCTTCTGTGGAAGGACGGAATGTTCCCAGGCCTGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGCCACTGCACAGAACTACCAGCATCCATGGTCAGCAATCAAGCTTGATAGGTCCTCAGTTTCACTCAAGGACAGTGAGTGTGGATCAACAAGTACAGTCCTCACAAACACTAACTACTGCAGATCCCTTGTTGCATATCCTTATCATGGAGATAGGTAG 1383 0.4758 MGKAGKWLRNFLTGKKEREKEKVKDKCGGGSSATNLNSSNGTENPTTPNSTTPKEKRRWSFRRSSATNTSTPTTPSKELNFAEPNVTASQTPQAAASTDIPLDDEQKKHAMAVAAATAAAADAAVAAAQAAAAVIRLTSGSNGTAAEEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRIRVASSEGKLYQKQSSFRNTTEEDLYAQVYNEMERGMEENIKIVEMDVCELKGNSRSRSSSVHRFPAYYSKEENLKVSPAPSALTEFSPRACSGHFEDCFSTAQSSPQCYSSASQIDDLKHPFSFHRAGYAEAMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRASVEGRNVPRPVRMQRSSSHVGATAQNYQHPWSAIKLDRSSVSLKDSECGSTSTVLTNTNYCRSLVAYPYHGDR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc67g00014 460 MobiDBLite consensus disorder prediction 10 27 - -
Stsc67g00014 460 MobiDBLite consensus disorder prediction 1 79 - -
Stsc67g00014 460 ProSiteProfiles IQ motif profile. 147 175 IPR000048 GO:0005515
Stsc67g00014 460 MobiDBLite consensus disorder prediction 30 54 - -
Stsc67g00014 460 ProSiteProfiles IQ motif profile. 171 198 IPR000048 GO:0005515
Stsc67g00014 460 Gene3D - 145 196 - -
Stsc67g00014 460 MobiDBLite consensus disorder prediction 365 392 - -
Stsc67g00014 460 Pfam IQ calmodulin-binding motif 149 167 IPR000048 GO:0005515
Stsc67g00014 460 Pfam IQ calmodulin-binding motif 174 190 IPR000048 GO:0005515
Stsc67g00014 460 MobiDBLite consensus disorder prediction 362 411 - -
Stsc67g00014 460 SMART iq_5 169 190 IPR000048 GO:0005515
Stsc67g00014 460 SMART iq_5 146 168 IPR000048 GO:0005515
Stsc67g00014 460 MobiDBLite consensus disorder prediction 63 79 - -
Stsc67g00014 460 Pfam Protein of unknown function (DUF4005) 332 393 IPR025064 -
Stsc67g00014 460 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc67g00014 Stsc-Chr67 110002 111944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc67g00014 1 455 IQD Protein Family AT4G14750 46.138 1.13e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc67g00014 - - gmx:100817667 576.244