Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc676g00003 ATGGAACTCTTCTCTATCCAAATCCTTCTTCTCTTCCTCTCCTTTCTCACCTTTCTCTACCTCCACCACCGAAAGCCCAAAACTACACCCACAGGCTTCAAAGCCTACCCTATCGTGGGCTCACTTCCTCACTTCCTCCTCAACCGCCATCGCTTCCTCGACTGGACCACTAATGTCCTCCGCAACTGCCCCACCCACTCCGCCGTCTTCCGCCGTCCCGGTAAGGTCCACGGCATCATTACAGCCAACCCGGACAACGTCGAACACGTCCTCAAGACCAATTTCCATAACTACCCCAAGGGTGAACGCTTCATCTACCTCCTCCGAGACTTCCTCGGCCAAGGAATCTTCAACTCCGACGGCGATCTCTGGAAACTCCAACGCAAAACCGCAAGCTATGAATTCAACACAAAATCGCTCCGAAACTTCGCCATCCAAAACGTCACCGTGGAGATCCAAACGAGGCTCATTCCGTTGCTCCAAAGAGCTTCCGAATCTGAATCCGTCCTCGACTTGCAAGACATTCTTGAGAGATTCGCCTTTGACAACATTTGCAAGCTAGCCTTCAACGCCGACCCGGCGTGCCTCTCCGCCGAAGGCTCTAGCGATGCCACGGTGGGCGGCGAATTCATGCGCGCGTTCGAGGATGCCGCTGCACTCAGCTCCGGGAGGTTTATGAGCGTGTTTGAGTGGGTATGGAAGCTCCAGAAGTTTCTCAACTTTGGAAGCGAAAAGAGGCTTCGGGAATCAATCTCCATCGTACACGCGTTCGCTGATAAGATCATACGGTCCAGAATGGAAAGAAAGGATCTCGCTAACGATGACGTGGACCTTTTATCGCGGTTCATGGCCACAGAGGATAACTCCCCTGAGTTTCTGCGCGATATTGTTATAAGCTTCATTTTGGCGGGACGTGATACGACGTCGTCTGGGCTGAGTTGGTTCTTTTGGATCCTCTCTTCAAGACCTGACGTCAAGGATAAAATAATCAAAGAAATTGAAAGCGTTCGCGTCTCGAGCGAAAAGCGTGATTCCGGTGAGGCAGGGTTTGGGTACGAAGAGTTGAAGGAGTTAAAATACTTACACGCCGCGATTTCAGAATCAATGAGGCTGTATCCTCCGGTGCCTGTAGACACTATGGCGTGCTTGAACGACGACGTTTTGGCTGACGGTACGCGTGTTAAGAAGAATTGGTTTGTGACGTATCATACTTACGCGATGGGGAGGATGGAGAGTATTTGGGGGAGTGACTGGGCGGAATTTAAACCGGAAAGGTGGTTTGATGAGGATAGTGGGGTTATTCGAACCGAAAGTCCGTTTAGGTATCCGGTTTTTCATGCTGGAGCGAGGATGTGTTTGGGTAAGGAGATGGCTTATATTCAAATGAAGTCTATTGTGGCATCGGTGATGGAGAGGTTTGAGCTGAATGCCGTGGATAAGGACACGTGTCCTGAGCAGCATTTGTCCTTGACCTTGAGGATCAAAGGTGGGTTGCCAGTGCGAGTGAGGCCAAGAGAGAGTGCGTGA 1527 0.5108 MELFSIQILLLFLSFLTFLYLHHRKPKTTPTGFKAYPIVGSLPHFLLNRHRFLDWTTNVLRNCPTHSAVFRRPGKVHGIITANPDNVEHVLKTNFHNYPKGERFIYLLRDFLGQGIFNSDGDLWKLQRKTASYEFNTKSLRNFAIQNVTVEIQTRLIPLLQRASESESVLDLQDILERFAFDNICKLAFNADPACLSAEGSSDATVGGEFMRAFEDAAALSSGRFMSVFEWVWKLQKFLNFGSEKRLRESISIVHAFADKIIRSRMERKDLANDDVDLLSRFMATEDNSPEFLRDIVISFILAGRDTTSSGLSWFFWILSSRPDVKDKIIKEIESVRVSSEKRDSGEAGFGYEELKELKYLHAAISESMRLYPPVPVDTMACLNDDVLADGTRVKKNWFVTYHTYAMGRMESIWGSDWAEFKPERWFDEDSGVIRTESPFRYPVFHAGARMCLGKEMAYIQMKSIVASVMERFELNAVDKDTCPEQHLSLTLRIKGGLPVRVRPRESA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc676g00003 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc676g00003 508 CDD CYP86A 69 498 - -
Stsc676g00003 508 FunFam Cytochrome P450 23 508 - -
Stsc676g00003 508 SUPERFAMILY Cytochrome P450 20 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 Pfam Cytochrome P450 30 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 Gene3D Cytochrome P450 15 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc676g00003 508 PANTHER CYTOCHROME P450 19 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc676g00003 Stsc-Chr676 22707 25029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc676g00003 25 505 Cytochrome P450 AT3G56630 62.033 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc676g00003 - - gmx:100812147 716.842