Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc672g00006 ATGGCATCTAAGACGCTTCTTCCTATATCTATGAAGCACAAGAGGGGTGCTGCAATTGCTTTGGATCATTCACCACCACCACCACCACCATTTCCCCGTTCTTCAATTCTAACTGCAACAACAATGGTGGTCAAAGGAATTGAAAACAATGACGTTTCTGCGAGGCTCCTTTCACGTTCTCTGTCTTCGTCTTCTTCTTCTTCGGATGAGGTAAAGACCGTTTTGCCCTCCAAGAATGGAAATGCGATCAGTCAGAAGAAGAGGAGAAGGCGGAATGCGAGTGAGGATTCGTTGCCTTCGATCTCCAATGACAATGGGGATGATGATGATCGTGTTCATGGTGATGATAGAAAGTTTTCGTCTTCTTCAATTGGGGAAGATGTTAGGCATGTTGCATCTGAGACATTTCTATTGACAAGGCTTTTCTTGACCATGTTGTCATACCTTGGGATAGGCTATAAATGGATCATACAATTCCTTGCACTCGGTTGTTATGCAGTTATGATTTTCCCTGGAGTTATTCAAGTTGGTTATTACTATTTCTTCGACAGCCAGATACGCAGAAGCATAGTGTACGGAGATAAACCACGAAATCGGCTTGACTTGTATATACCCAAAGATAGCAATGGTCCGAAACCAGTTGTCGCATTTATTACTGGTGGAGCCTGGATTATTGGTTACAAAGCATGGGGTTCTCTTCTTGGGAAACAGTTATCAGAGAGAGATATCATTGTGGCTTGCATTGATTACAGAAATTTTCCTCAAGGAACCATGAGTGATATGCTAGCTGATGCTTCTGAAGGCATCTCGTTTGTGTGCAATAACATTTCAAAATGGGGGGGTGACCCTGACAAAATTTACCTAATGGGGCAGTCAGCCGGGGCGCATATTGCCGCATGTGCGATTGTGGAGCAGGCAATCAAAGAGGCTGCCAAAGAAGAGGTTTCATGGAGTCTTTCCCAGATTAAGGCTTATTTTGGATTGTCCGGAGGGTATAATATATTTAACCTGGTTGATCATTTCCACAACAGAGGTCTTTATCGTTCGATCTTTTTAAGCATAATGGAAGGAGAGGAATCCCTAAAACGCTTTTCACCAGAAGTAATGGTTCAAGATCCAAACATGGCAGATGCTGTTAAACTATTACCTCCTATAGTTCTTTTTCACGGCACCGGAGATTATTCGATACCATCAGATGCAAGTACATCATTTGCTGAAACTCTTAAAAAGCTTGGAGTCAAAGCTGAAGCAATTCTCTATGAAGGGAAGACTCATACAGATGTGTTTCTTCAGGATCCCATGAGAGGCGGCACGGATGCTATGTTCGAAGATCTAGTCGGCTATATTCATGCTAACGATCCCGAGGCCCGCGCCAGAGATGCCCTGGCTCCTCCAAGGAGGCGCCTCGTACCCGAATTCATGTTGAAATTGGCTCATGCTGTTAGTCCTTTCTAG 1455 0.4385 MASKTLLPISMKHKRGAAIALDHSPPPPPPFPRSSILTATTMVVKGIENNDVSARLLSRSLSSSSSSSDEVKTVLPSKNGNAISQKKRRRRNASEDSLPSISNDNGDDDDRVHGDDRKFSSSSIGEDVRHVASETFLLTRLFLTMLSYLGIGYKWIIQFLALGCYAVMIFPGVIQVGYYYFFDSQIRRSIVYGDKPRNRLDLYIPKDSNGPKPVVAFITGGAWIIGYKAWGSLLGKQLSERDIIVACIDYRNFPQGTMSDMLADASEGISFVCNNISKWGGDPDKIYLMGQSAGAHIAACAIVEQAIKEAAKEEVSWSLSQIKAYFGLSGGYNIFNLVDHFHNRGLYRSIFLSIMEGEESLKRFSPEVMVQDPNMADAVKLLPPIVLFHGTGDYSIPSDASTSFAETLKKLGVKAEAILYEGKTHTDVFLQDPMRGGTDAMFEDLVGYIHANDPEARARDALAPPRRRLVPEFMLKLAHAVSPF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc672g00006 484 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 119 442 - -
Stsc672g00006 484 MobiDBLite consensus disorder prediction 63 121 - -
Stsc672g00006 484 Pfam BD-FAE 200 408 - -
Stsc672g00006 484 SUPERFAMILY alpha/beta-Hydrolases 183 452 IPR029058 -
Stsc672g00006 484 MobiDBLite consensus disorder prediction 63 82 - -
Stsc672g00006 484 MobiDBLite consensus disorder prediction 104 121 - -
Stsc672g00006 484 Gene3D alpha/beta hydrolase 182 434 IPR029058 -
Stsc672g00006 484 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 182 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc672g00006 Stsc-Chr672 24236 29384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc672g00006 23 484 Carbohydrate Esterase AT1G26120 63.125 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc672g00006 K15889 - gmx:100790850 619.772