LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc670g00012	ATGGAACCATACCCTTATTCTCCCAAGGGAAGTGGAGCCTTATATTGGGAATCCTGTAGGTCTCAGTTGGAGGGATCAACATCATTAGATGGTGATATGAGCAATTCATTTTCAGATGATATGGCTTGTAGCTTCTCCGAGCTCATGAACTTTGATCCTTATGCTGGCTTGTGCAATAGCCCATTGATCGATCGGGTTTTCAGTAATGGCCTTCCATCAACATATCCATCTACCCCTGGGTTCAATCTAGAAGAACACAACAGTAGCCAATTCTTCATGACAGAAATGAATGGAAATTTCAACACTAAACAAGGCTCCCCTGGTTATGGGGAGAAACTTACTTTTCAACAAATGGACACCCTACTTGGTTTCTTTGATAGTACAGATGATACACATAGTTTAAGTTCTAAGCAAAAAACTAATGGCTCTTCTCAACAACTTGATACCTGTGACGCCGTTGGCAATTATATCGTGACCAAGCCACCTAGTTTGTCACTTGATGAGAGAATGTTGAAAGCCTTGTCCTTCTTAATGGAATCAGCTGGTGGTGGAATATTGGCACAGGTTTGGGTTCCTATAAAGGATGGTGATCAATTCTTCTTGAGCACAAGTGAACAACCTTATCTACTAGACCAAATTCTTGCCGGATATCGTGAAGTCTCAAGAACATACACATTTTCTGCTGAAGGAAAATCGGGTTCTTTCCCAGGACTTCCTGGTCGTGTGTTTATGTCCAAAACTCCTGAGTGGACTTCCAACGTTGGTTATTACAATAAGAATGAGTACTTGAGGATGGATCATGCGATTAATCATGAGGTTCGTGGATCGATTGGTTTACCCATATCTGATATGCACTCTGAACTGCCATGCTGTGCTGTACTAGAGCTTGTCACTACAAATGAAAAGCATGATTTTGACAAGGAAATGGATATTGTTTGTCATGCACTACAGAATGTAGATCTAACGGCTAATATGCCTCCTCGGCTTCTTCCTCAGTGTCTTTCAAACGGCAATCGTGCTGCTTTAACAGCCATAATTGATGTCTTAAGATCCGTTTGTCATGCACATAGATTGCCACTGGCACTGACATGGATTCCTTGTTGTGTCAACGAAGACACAGAAGGTAAAGATACAAAGATACACATTAAAGAGGGTCATTCGAGTCCTCGTGAAAAGAACATCCTGTGCGTCGAAGAATCTGCATGCTATATAACTGATAATGCAATGAAAGGATTTGTTCATGCTTGCATTGAACACCATCTTGAGGAAGGGAAAGTTGCAATTAGGCTGAGGAGTACTTATACTAATGATGATGATTACATACTGGAATTCTTTTTGCCTGTCAACATGAAAGGGAGTTCAGAGCAGCAGCTTCTCTTAGACAACCTCTCAGGTACCATGCAGAGAGTTTGTAGGAATTTAAGAACGGTTTCAGATGAGGAATTATCAAGAATGGAAGGCTCACAAGTAGGAATTGAAAACAAAAATGTCCCGGGAATTTATCCTATGTCCAGTAGAAACTCCCAGATACCATTAACAAACGGTAATCATGATTCAGTCCGTAAGATGTCCATCAAGGAATCTTACCATGGAAACAATGGAATCGAGTCTTCTCATAACCAGGAAAGGAATGGATCAAGAAGGATGGTTGAGAAAAAGAGAACATCTGAGAAGAAAGTTAGTTTGAATGTTCTTCAGCAACACTTTTCTGGTACTCTAAAGGATGCTGCTAGGAGCATTGGTGGTTAG	1749	0.4094	MEPYPYSPKGSGALYWESCRSQLEGSTSLDGDMSNSFSDDMACSFSELMNFDPYAGLCNSPLIDRVFSNGLPSTYPSTPGFNLEEHNSSQFFMTEMNGNFNTKQGSPGYGEKLTFQQMDTLLGFFDSTDDTHSLSSKQKTNGSSQQLDTCDAVGNYIVTKPPSLSLDERMLKALSFLMESAGGGILAQVWVPIKDGDQFFLSTSEQPYLLDQILAGYREVSRTYTFSAEGKSGSFPGLPGRVFMSKTPEWTSNVGYYNKNEYLRMDHAINHEVRGSIGLPISDMHSELPCCAVLELVTTNEKHDFDKEMDIVCHALQNVDLTANMPPRLLPQCLSNGNRAALTAIIDVLRSVCHAHRLPLALTWIPCCVNEDTEGKDTKIHIKEGHSSPREKNILCVEESACYITDNAMKGFVHACIEHHLEEGKVAIRLRSTYTNDDDYILEFFLPVNMKGSSEQQLLLDNLSGTMQRVCRNLRTVSDEELSRMEGSQVGIENKNVPGIYPMSSRNSQIPLTNGNHDSVRKMSIKESYHGNNGIESSHNQERNGSRRMVEKKRTSEKKVSLNVLQQHFSGTLKDAARSIGG	582

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc670g00012	582	PANTHER	PROTEIN NLP8	104	424	IPR045012	GO:0003700
	Stsc670g00012	582	MobiDBLite	consensus disorder prediction	528	560	-	-
	Stsc670g00012	582	MobiDBLite	consensus disorder prediction	541	559	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc670g00012	Stsc-Chr670	25858	29425	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc670g00012	3	581	NLP Transcription Factor Family	AT2G43500	45.024	7.49e-152	458

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc670g00012	-		-	aip:107613413	1018.07