Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc66g00011 ATGGCTGATGGCACAAGAGTTTTGGGAAAGGAGTATCACCAAAAGCTGACTTCACTACTCGAAGACTACCATTATGACTCATTCTTCGAAAGGAACAACTTGCTTAAAAGGTTGGAGAAAAGTGTATGTGATGTTGGAGCTGTTCTTGATGATGCTGAGCAGAAGCAGTTCACTGTCAAGGAAGTCAAGAAGTGGCTTGTTGATTTCCAACATGCTCTCTATTTGGCTGATGACTTGCTTGATGAACTCTCCACTAAAACTGCCACTGCCACTCCAAGGGATCCAGGTATCTCTTCTTACTGTTCTTCTCTTGTTGATTCAATCTTGGAAGATAGTGGTGAAATGGAAGCCATAGTTCGAAGACTAGAGTCTGTTGTAGGACGGACAAATAATCTCCATCTGGAGAAGTGCGCCAAGGTGGACATGTCGTCATGGAGAACTCCATCCACATCTCTTGTTGTAAGTTCTGACATATTTGGTCGGGACAAAGACAAGGAAAAGATAATTAAACTCTTGCTAGATGATACTTGTCATGGTGAATCACCTTTCATTGTGATCCCCATCATGGGTCTAGGTGGAATAGGAAAAACTACTTTGGCTCAATTGGTTTACAATGATGCCAGGGTGGTGGAAAATTTTGACACTAGAGTATGGGTGTGTGTAGCTGAAAATTCTGACCCTGTTCATGTTACGAGGACAATGATAGGGGCAATAGATTCCTGTTCCTGTAGCATGGACAATTTTGATGTTCTTCAGACTAATTTGAAGAACAAGTTGATAGGAAAGACATTCTTAGTCGTTTTAGACGATGTTTGGCATGGTCGACAAGACACATGGGAGGATCTTCTAAAACCTTTCCAATATGGGAATAATGGAAGTAAAATTCTATTGACAACCCGTAGTGAAAAGGTTGCTTCTATGTTCGTAGCTACCAGTCAACATTATCAACCGAGTTTATTGTCTGACGAAGATTGTTGGTCGGTGTTTTTGAAGCATTCATCTATTCCTAGTAATTTTGAACAATATGCAACTCTAGAACGAATTGGTAGAAAAATTGTTAAAAAGTGTAAAGGTTTACCTTTGGCTGTGAAAACTCTTGGAGGTTTATTGCGCCATAAGTATAATGTAGGGGATTGGGAGAATATACTTAGAAGTAAAATTTGGGAGCTTCGGGAAGATGAGAGTATGATAGTTCCTGCATTAAGAGACACTGTTGTTGGAAAGCATGAAGAGAATGGGATAAGAGAATTGGGACCAATTGATGTTCATGGCTCATTTCGCATTTCCAACTTAGAGAATGTCACCAACAGCGGCGAAGCTTTGGAGGCAAGGATGGGCAACAAGAAGCACATCACCATTTTAGAATTGAAATGGCTTCCAGATGGTGATCTTGTTGATCTTCAAACTGAAAGAGATATACTTGACAAGTTCCGGCCTCATCAAAACTTGAAAGAGTTGTCCATTAATGGTTACAAGGGTGAAACATTCCCAGACTGGTTAGGCTTAAGCCTATCTTGCTACTCCAATATGACTAAACTGTGTCTGAGGAGTTGTAAGAATTGTAGTAAGCTTCCTTCACTAGGACAGTTACCCTCTCTGCAGCACCTGGACATATTTGAACTTGATGTGTTGAAGATAATTGGTCCTGAGTTTTACAAGAACGGTGAATCATCATCATCTCATGAGGAGACACCCTTTAGATCTCTTGAGACTCTTGCATTCGATAAAATGCATGGATTGCAAGAGTGGCATATTCCTCATGAGTTTGATGGATTTCCAAAACTTAAAAGCCTTGAAATAACAGAATGTCCAGTGTTAACTGGAAACTTGCCAGCTAAGCTTCCGGCTCTGGAGCAACTTTCCATTATTCAATGTGAAAAGCTTGCCTGTTCACTTCCAAGAGAAGCCAAGCTTGCCGAGGATGAAGCAGCAATCTTTTTTAGAACCGATCTGGCAAAGTCTGTATTGGAGAAGTGCCTGCCCCACATCCAATCTTCATCTCTCCAACGTTTGATAATCCGGGAGTGTTCAACATTAACATTATCAGAGCCATTGCAACACAAGTGGCTAACGGAGATACACGTGTCCCAGTGTGACTCAGTGAGGTTGTTTCCATTGGGGGCCCTTCCAAATCTCAAGAAACTGGACATCTCACATTGCTCAGAAATGGATTCTTTCGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACTCTTAAGATCCATAAATGCCAGAAACTAGAGAGGTGGATAACATCCAATGGCTTTCACAGTGAAGGCCTTACCCATCTCAGGCTTGAACTATGGAATGAAGTTAAGAAGTTCCCAACGGAGGGTTGCCTTCCTTCTTCCCTTCAGTCTCTACAATTGTATATATTTCACAGTCTGGAGACGCTAGATTGCAAGGGCCTTCACCATCTCACCTCCCTCAAAGAATTAACAATTGAATACTGTGGAAAGCTGGAGAATATAACACAAGAAAACCTGCCTGCCTCCATATCAAAACTCCTCATCATGGGACAGTGCCCTTTGAAGAGTAAGCTGGAAAAGATGAATGACCCTCGGATTCAATTTGAAACAGGTAATTGTTTTCTCTCTCTGCTTCCCTAA 2607 0.4173 MADGTRVLGKEYHQKLTSLLEDYHYDSFFERNNLLKRLEKSVCDVGAVLDDAEQKQFTVKEVKKWLVDFQHALYLADDLLDELSTKTATATPRDPGISSYCSSLVDSILEDSGEMEAIVRRLESVVGRTNNLHLEKCAKVDMSSWRTPSTSLVVSSDIFGRDKDKEKIIKLLLDDTCHGESPFIVIPIMGLGGIGKTTLAQLVYNDARVVENFDTRVWVCVAENSDPVHVTRTMIGAIDSCSCSMDNFDVLQTNLKNKLIGKTFLVVLDDVWHGRQDTWEDLLKPFQYGNNGSKILLTTRSEKVASMFVATSQHYQPSLLSDEDCWSVFLKHSSIPSNFEQYATLERIGRKIVKKCKGLPLAVKTLGGLLRHKYNVGDWENILRSKIWELREDESMIVPALRDTVVGKHEENGIRELGPIDVHGSFRISNLENVTNSGEALEARMGNKKHITILELKWLPDGDLVDLQTERDILDKFRPHQNLKELSINGYKGETFPDWLGLSLSCYSNMTKLCLRSCKNCSKLPSLGQLPSLQHLDIFELDVLKIIGPEFYKNGESSSSHEETPFRSLETLAFDKMHGLQEWHIPHEFDGFPKLKSLEITECPVLTGNLPAKLPALEQLSIIQCEKLACSLPREAKLAEDEAAIFFRTDLAKSVLEKCLPHIQSSSLQRLIIRECSTLTLSEPLQHKWLTEIHVSQCDSVRLFPLGALPNLKKLDISHCSEMDSFGEECLPPSLTTLKIHKCQKLERWITSNGFHSEGLTHLRLELWNEVKKFPTEGCLPSSLQSLQLYIFHSLETLDCKGLHHLTSLKELTIEYCGKLENITQENLPASISKLLIMGQCPLKSKLEKMNDPRIQFETGNCFLSLLP 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc66g00011 868 Gene3D - 142 313 IPR027417 -
Stsc66g00011 868 PANTHER DISEASE RESISTANCE PROTEIN RP 412 626 IPR044974 GO:0006952
Stsc66g00011 868 Gene3D - 12 121 - -
Stsc66g00011 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 401 IPR027417 -
Stsc66g00011 868 Pfam Rx N-terminal domain 14 89 IPR041118 -
Stsc66g00011 868 Gene3D Ribonuclease Inhibitor 645 862 IPR032675 -
Stsc66g00011 868 SUPERFAMILY RNI-like 473 835 - -
Stsc66g00011 868 Gene3D - 319 398 IPR042197 -
Stsc66g00011 868 PRINTS Disease resistance protein signature 185 200 - -
Stsc66g00011 868 PRINTS Disease resistance protein signature 356 370 - -
Stsc66g00011 868 PRINTS Disease resistance protein signature 707 723 - -
Stsc66g00011 868 PRINTS Disease resistance protein signature 258 272 - -
Stsc66g00011 868 Pfam NB-ARC domain 162 384 IPR002182 GO:0043531
Stsc66g00011 868 Gene3D Ribonuclease Inhibitor 409 644 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc66g00011 Stsc-Chr66 57587 62110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc66g00011 158 373 WRKY Transcription Factor Family AT5G45050 27.027 1.89e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc66g00011 - - ahf:112729751 590.497