Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc66g00005 ATGGCTGCAAAACTTGATGGTGTAGCTTATCTCACTTCCTTTGTTGATGCTATTTTAGACAACTTGCCTTCAATACTTGATCACTTTGTCCTCAGTGGAAACCACTCTGCCTTGAAGTTGCTTCGAAGTTTGGAGGAATGTCTGTATGATGTCCGACCTGTTCTTGATGATGCAGAGCACAAACAGTTCACTGATAAGAGAGTCAAGAAGTGGCTTGCTGATCTCCATGATGCTCTCTATTTCGCTGATGACCTGCTGGATGAACTCTCCACTAAAATTGTTACTGCCACTCCAAGGGATCCAGGTTTCTCTTCTTACTTCTCTTCTGTTGTTGATTCATCTATTGAAGGCTGTCGTGACTTGGAAAACATAGTTCAAAGACTAGAGTCTCTTGTAGCACGGAAAAAATATTTCCGTCTGAGAGAGTCTGCTGAGGTGGACATGTTGTCATGGAGAACTCCATCCACTTCTCTTGTAGTAAGTTCTGATATATTTGGTCGGGAAAAAGACAAGGAGGAGATAATCAAATTGCTGTCAGCTGATACTTGTCAGGCTGAATCACCTTTCACTGTAATCCCAATTTGGGGTATGGGTGGAATAGGAAAAACTACCTTGGCTCAACTGGTTTACAGTGATGCCGAAGTGGTGAAAAATTTTGACACTAGAGTATGGGTTTGTGTAGCTGAAAATTCAGACCCTGTTCATGTTACAAGGACAATAATAGGGGCAATAGATTCCTGTCCTTGCAGCATGGACAATTTTGATGTTCTTCAGACTAAGTTGAAGGACAAGTTGATAGGAAAGAAATTCTTACTTGTTTTAGACGATGTCTGGCATGGTGGACAACGCACATGGGAGAATCTTCTTAAACCTTTCCAATATGGGAATAATGGAAGTAAAATTCTGTTAACAACCCGTATTGAAAAGGTTGCTTCTACGTTCGCTGCTACCAGTCAACATTATCGACTAGATTTATTGTCCGATGAAGATTGTTGGTCGGTGTTTTTGAAGCATTCATCTATTTCTACTAATTTAGAACAATATGCAACTCTAGAACCAATTGGTAGAAATATTGTTGAAAAATGTAAGGGATTACCTTTGGCTGTGAAGACACTTGGAGGCTTATTGCGCAACAAGAGTGATGTAGGGGATTGGAAGAAAATACTTGAAAGTAAAATTTGGGAGCTCCCAGAAGATGAAAGTGAGATTGTTCCGGCTTTAAGAGTAAGTTATCACTACCTCCCTTCACATTTAAAACGGTGCTTTGTTTATTGCTCATTATTCCCTGAAGATTATCAATTTGATAAAGACGAATTAATCTTGCTTTGGATGGGTGAAGATCTCTTACGACCAATGGGGAACAACACATTAGAAAATATTGGTTCTGTATATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAATCTTCCGGTGCTTCTGCTGAGTTATTTGTAATGCATGATCTCATGCATGATCTTGCAACGTTTTTTGCTGGGAAATTCTTTTTCAGAGAATTTGGCAACCAACACATGGTTGACAGCAGAACTCGTCATTTGTCATATGATTGGGATCCAATCTCAAGATTTCCAGAGGCCTCTGATGGAGCAATAAATATGAGAACATTTCTATGTGTTGATGATAAATCAAATGAAATCAAAAGTGATTTTTGGCTAAAACAATTAAGGTGTTTAAGAGTTTTGGCTTTTCAAAAGTGTAAAAACTTGTCACTGCTTGATTCAATAGGCGAATTGATTCATTTGCGTTATTTGAATCTCTCTTGGACATCTATTGTCACATTGCCTGAATCATTGTGTAAATTATACAATCTCCAAACCTTGAAGTTGAGAGATTGTTATAAGCTTGAGATGCTTCCCAGCCGCATGCAAGATCTTGTGAACCTGGGCCACCTTGATATCAGAGGAACTCATCATTTGAAAGAGATGCCAAAGGGAATGAGCAAGTTAAAGCATTTGAATTTCTTACCATGCTATATTGTGGGAGAGCATGAAGAGAATGGGATAAGAGAATTGGGACCAATTGATGTTCATGGCGCATTTTGGATTTCCAAATTAGAGAATGTGAACAACAGCAGCGAAGCTTTGGAGGCAAAGATGGGTAACAAGGAGCACATCAACATTCTAGAATTGAAGTGGCGTTCGAATGGCAAGACTGTCAATGTTCAAACTGAAAGAGATATACTTGACAAGCTCCGACCTCATGTCATGAGGGGACAGTGA 2238 0.3919 MAAKLDGVAYLTSFVDAILDNLPSILDHFVLSGNHSALKLLRSLEECLYDVRPVLDDAEHKQFTDKRVKKWLADLHDALYFADDLLDELSTKIVTATPRDPGFSSYFSSVVDSSIEGCRDLENIVQRLESLVARKKYFRLRESAEVDMLSWRTPSTSLVVSSDIFGREKDKEEIIKLLSADTCQAESPFTVIPIWGMGGIGKTTLAQLVYSDAEVVKNFDTRVWVCVAENSDPVHVTRTIIGAIDSCPCSMDNFDVLQTKLKDKLIGKKFLLVLDDVWHGGQRTWENLLKPFQYGNNGSKILLTTRIEKVASTFAATSQHYRLDLLSDEDCWSVFLKHSSISTNLEQYATLEPIGRNIVEKCKGLPLAVKTLGGLLRNKSDVGDWKKILESKIWELPEDESEIVPALRVSYHYLPSHLKRCFVYCSLFPEDYQFDKDELILLWMGEDLLRPMGNNTLENIGSVYFDELVARSFFQSSGASAELFVMHDLMHDLATFFAGKFFFREFGNQHMVDSRTRHLSYDWDPISRFPEASDGAINMRTFLCVDDKSNEIKSDFWLKQLRCLRVLAFQKCKNLSLLDSIGELIHLRYLNLSWTSIVTLPESLCKLYNLQTLKLRDCYKLEMLPSRMQDLVNLGHLDIRGTHHLKEMPKGMSKLKHLNFLPCYIVGEHEENGIRELGPIDVHGAFWISKLENVNNSSEALEAKMGNKEHINILELKWRSNGKTVNVQTERDILDKLRPHVMRGQ 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc66g00005 745 Gene3D - 18 127 - -
Stsc66g00005 745 FunFam Probable disease resistance protein At1g61300 151 319 - -
Stsc66g00005 745 SUPERFAMILY L domain-like 485 663 - -
Stsc66g00005 745 FunFam Probable disease resistance protein At1g63360 411 496 - -
Stsc66g00005 745 Pfam Rx N-terminal domain 18 95 IPR041118 -
Stsc66g00005 745 Gene3D - 325 409 IPR042197 -
Stsc66g00005 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 425 IPR027417 -
Stsc66g00005 745 PANTHER DISEASE RESISTANCE PROTEIN RP 46 731 IPR044974 GO:0006952
Stsc66g00005 745 Gene3D - 410 495 IPR036388 -
Stsc66g00005 745 Gene3D - 148 320 IPR027417 -
Stsc66g00005 745 Gene3D Ribonuclease Inhibitor 527 737 IPR032675 -
Stsc66g00005 745 PRINTS Disease resistance protein signature 264 278 - -
Stsc66g00005 745 PRINTS Disease resistance protein signature 605 621 - -
Stsc66g00005 745 PRINTS Disease resistance protein signature 362 376 - -
Stsc66g00005 745 PRINTS Disease resistance protein signature 191 206 - -
Stsc66g00005 745 Pfam NB-ARC domain 167 409 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc66g00005 Stsc-Chr66 30733 33036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc66g00005 176 527 WRKY Transcription Factor Family AT5G45050 24.309 1.74e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc66g00005 - - ahf:112729759 1039.64