Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc66g00004 ATGGCTGCAAAACTTGATGGTGGAGCTTATCTCACTTCCTTTGTTGATGCTATTTTAGACAACTTGTCTTCAATACTTGAAGCTGATGACTCTGTCCTCAGTGGAAACCACTCTGCCATGGAATGGCTTCCAAAGTTGGAGAAAAGTCTGTCTGATGTCCGACCTGTTCTTGATGATGCTGAGCTGAAGCAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATTTTGCTGATGACTTGCTCGATGAACTCTCCACTAAAATTGCCACTGCCACTCCAAGGGATCCAGGTATCTCTTCTTACTGTTCTTCTGTTGTTGATTCATATGTTGAAGATAATGGTTACATGGAAAGAATAGTTCGAAGACTAGAATCTGTTGTAGCACGGAAAGATAATCTTCGTCTGGAGGAGAGTGCCAAGGCGGATATGTCGTCATGGAGAACTCCATCCACATCCCTCGTTGTAATTTCTGACATATTTGGTCGGGACAAAGACAAGGAGGAGATAATCAAGTTGCTGTTAGCTGATACTTGTCATGCTCAATCATCACCTTTTACTGTTATCCCAATTTGGGGTATGGGTGGAATAGGAAAAACAACCTTGGCTCAGCTGGTTTACAGTGATGCCAAAGTGGTAGAAAATTTTGACATTAGAGTATGGGTGTGTGTAGCTGAAAATTCAGACCCTATTCATATTACAAGGACAATAATAGGGGCAATAGATTCTAGTCCTTGCAGCATGGACAATTTTGATGTTCTTCAAACTAAGTTGAAGGACAAGTTGATAGGAAAGACATTCTTACTCATTTTAGATGATGTCTGGCATGGTGGACAACGTACATGGGAGAATCTTCTTAAACCTTTTCAATATGGGAATAATGGAAGTAAAATTCTGTTAACAACCCGAATTGAAAAGGTTGCTTCTACGTTCCCTGCTACCAGTCAACCTTATCGACTAGATTTATTGTCCGATGAAGATTGTTGGTCGGTGTTTTTGAAGCATTCATCCATTTCTACTAATTTAGAACAATATGCAACTCTAGAACCAATTGGTAGAAATTTTGTTGAAAAATGTAAGGGGTTACCTTTGGCTGTGAAGACACTTGGAGGTTTATTGCGCAACAAGAGTGATGTAGGGGATTGGAAGAAAATACTTGAAAGTGAAATTTGGGAGCTCCCGGAAGATGAAAGTGAGATTGTTCCCGCCTTAAGAGTAAGTTATCACTACCTCCCTTCACATTTAAAGCGGTGCTTTGTTTATTGCTCATTATTCCCTGAAGATTATCAATTTGACAAAGATGAATTAATCTTGTTATGGATGGCTGAAGATCTTGTGCAACCAATGGAAAACAACACATTAGAGAATATTGGTTCTATATATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAATCTTCCCGTGCTTCTGCTGGATTATTTGTAATACATGATCTCATGCATGATCTAGCAACCTTCTTTGCTGGAAAATTCTTTTTTAGAGAATTTGGCAATCCACGCATGGCTGACTGCAAAACACGTCATTTGTCGTGTGATCGGGATCCAATCTCAAGATTTCCACAGGCCTATGGTGGAGCAATACATATGAGAACATTTCTATGTATTGATGTTAAACCAAATGATATCAGAATTGATCTTTTGCTAGAACAATCAAGGTGTTTAAGAGTTTTGTCATTTGAAAAGTTTCGAATCCTGTCATTGCCTGATTCAATTGTTGATAAATTGATTTATTTGCGTTATTTGAATCTCTCTAAAACACCTATTGTCACATTGCCTGAGTCATTATGTAAATTATACAATCTCCGAACGTTGAAGCTGAGAGATTGTTATTATCTTAAGATGCTTCCGAGCCGCATGCAAGATCTTGTGAACATGCGCCACCTTGATATCAGAGGAACTTATTTGAAAAAGATGCCGAACGGAATGAGCAAGTTAAACCATTTGAATTTATTAGGAAACTATATTGTGGGAGAGCATGAAGAGAATGGGATAAAAGAATTGGGACCAATTAATGTTCATGGCTCATTTCGCATTTTCAACTTAGAGAATGTGAACAACAGCAGCGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCCGCATTCTAGAATTGGAATGGCGTTCAACTTGTGACACCGTGGATGTTGAAAGTGAAAGAGATATACTGAAAGAGTTACGACCTCATTCAAACTTGAAGGAGCTATCAATTAAGGGATATAGGGGTGAAATATTCCCCAATTGGTTAGGCCTTTCTTGCTACTCCAATATAACCGAATTGAGAATGTATGGTTGTAAGAATTGTCGTGAGCTTCCTTCACTTGGACAGTTACCCTCTCTACAACATCTGGAGATTTTTCAACTGCATGGGTTGGAGAGAATTGGTGAGGAGTTTTACAAGAACGGTGAATCATGTCATGAGGGGACATGGACGCCCTTCAGATCTCTTGAAACACTGATATTTCGTCGCATGAATGGTTGGCGAGAGTGGCATACTCCTGATAACATGGATGCATTTCCTAAACTTAAAACCCTTTCAATGCATGACTGTCCGGTGTTGAGTGGAGATCTTCCTGCTCGCCTTCCGGCTCTGGAGGAACTTCGAATTCAATATTGCCAAAAGCTTGCATGTTCGCTGCCCAGAGCTCCCAAGCTTCGAGAAATAGATGCACACGGTTCGCAGAATTCTATCATAGAGGTGACACCGCGCAATGTAAGAATTGAAGGCTCTCAGCTGGTGCAGTCCGTATTGGAGTGTCTTCTCCACATCCAACCGCCCTGTTTCAAAAGTTTGATAATCAAGAGATGTAGGTCATCCATATCAATTTCGGGAGATTATCTGCCCGCTTCATTACAATATCTGAAAATCTTGAATTGCTCAAAATTAACATTCCCAGAGCCACTGCAACACAAGTTGCTAACGGAGATACATGTGAGCATGTGTGATTCAGTGACGTTGTTGCCATTGGTGGCCCTTCCAAATCTCAACACACTCGAGATCTCATATTGCCCCCGTCTAGTATCCTTACCGCCGCTAGGCGTTGCTGCGCCCCACCTAGAACATCTGACTATAAGAGAATGTCCAGAAATGGATTGTTTTGGAGAAGAGTGCCTCCCGTGGAGCTTGACAACTCTTGAGATATATAAATGCCAGAAACTAGAGAGGTGGATAACATCCAATGGTGGTTTGCAGAGTGAAGGCCTTACCCATCTTAGGCTTGAAGTATGGAATGAAGTTAAGTGGTTCCCAACAGAGGGTTGCCTTCCTGCTTCCCTTCACTCTCTACATTTGTCTTTATTTCAAAATCTGGAGACGCTAGACTGCAAGGGCCTTCACTATCTTACCTCCCTCAAAGAATTAAGAATTGAAAGGTGTCCAAAGCTGGAGAATATCACGGAAGAAAGGCTGCCTGCCTCCATATCAAAACTCCACATCTGTAGTGAATGTCCTTTGAGGCGTAAGCTGCAAGAGATGAACGACCCACGGATTCCAATCAAAACTCATGACTACTCAGACGAGGAGTCAAGCTCAGATTGA 3579 0.4113 MAAKLDGGAYLTSFVDAILDNLSSILEADDSVLSGNHSAMEWLPKLEKSLSDVRPVLDDAELKQFTDKRVKKWLVDLQDALYFADDLLDELSTKIATATPRDPGISSYCSSVVDSYVEDNGYMERIVRRLESVVARKDNLRLEESAKADMSSWRTPSTSLVVISDIFGRDKDKEEIIKLLLADTCHAQSSPFTVIPIWGMGGIGKTTLAQLVYSDAKVVENFDIRVWVCVAENSDPIHITRTIIGAIDSSPCSMDNFDVLQTKLKDKLIGKTFLLILDDVWHGGQRTWENLLKPFQYGNNGSKILLTTRIEKVASTFPATSQPYRLDLLSDEDCWSVFLKHSSISTNLEQYATLEPIGRNFVEKCKGLPLAVKTLGGLLRNKSDVGDWKKILESEIWELPEDESEIVPALRVSYHYLPSHLKRCFVYCSLFPEDYQFDKDELILLWMAEDLVQPMENNTLENIGSIYFDELVARSFFQSSRASAGLFVIHDLMHDLATFFAGKFFFREFGNPRMADCKTRHLSCDRDPISRFPQAYGGAIHMRTFLCIDVKPNDIRIDLLLEQSRCLRVLSFEKFRILSLPDSIVDKLIYLRYLNLSKTPIVTLPESLCKLYNLRTLKLRDCYYLKMLPSRMQDLVNMRHLDIRGTYLKKMPNGMSKLNHLNLLGNYIVGEHEENGIKELGPINVHGSFRIFNLENVNNSSEALEAKMGNKKHIRILELEWRSTCDTVDVESERDILKELRPHSNLKELSIKGYRGEIFPNWLGLSCYSNITELRMYGCKNCRELPSLGQLPSLQHLEIFQLHGLERIGEEFYKNGESCHEGTWTPFRSLETLIFRRMNGWREWHTPDNMDAFPKLKTLSMHDCPVLSGDLPARLPALEELRIQYCQKLACSLPRAPKLREIDAHGSQNSIIEVTPRNVRIEGSQLVQSVLECLLHIQPPCFKSLIIKRCRSSISISGDYLPASLQYLKILNCSKLTFPEPLQHKLLTEIHVSMCDSVTLLPLVALPNLNTLEISYCPRLVSLPPLGVAAPHLEHLTIRECPEMDCFGEECLPWSLTTLEIYKCQKLERWITSNGGLQSEGLTHLRLEVWNEVKWFPTEGCLPASLHSLHLSLFQNLETLDCKGLHYLTSLKELRIERCPKLENITEERLPASISKLHICSECPLRRKLQEMNDPRIPIKTHDYSDEESSSD 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc66g00004 1192 Gene3D - 15 119 - -
Stsc66g00004 1192 Pfam NB-ARC domain 170 394 IPR002182 GO:0043531
Stsc66g00004 1192 Gene3D Ribonuclease Inhibitor 545 928 IPR032675 -
Stsc66g00004 1192 Gene3D - 155 323 IPR027417 -
Stsc66g00004 1192 Gene3D - 413 498 IPR036388 -
Stsc66g00004 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 428 IPR027417 -
Stsc66g00004 1192 Coils Coil 123 143 - -
Stsc66g00004 1192 PRINTS Disease resistance protein signature 194 209 - -
Stsc66g00004 1192 PRINTS Disease resistance protein signature 1004 1020 - -
Stsc66g00004 1192 PRINTS Disease resistance protein signature 267 281 - -
Stsc66g00004 1192 PRINTS Disease resistance protein signature 365 379 - -
Stsc66g00004 1192 PANTHER DISEASE RESISTANCE PROTEIN RP 46 887 IPR044974 GO:0006952
Stsc66g00004 1192 FunFam Probable disease resistance protein At1g63360 414 499 - -
Stsc66g00004 1192 SUPERFAMILY RNI-like 827 1160 - -
Stsc66g00004 1192 Gene3D Ribonuclease Inhibitor 1052 1174 IPR032675 -
Stsc66g00004 1192 Gene3D Ribonuclease Inhibitor 940 1051 IPR032675 -
Stsc66g00004 1192 Gene3D - 328 412 IPR042197 -
Stsc66g00004 1192 SUPERFAMILY L domain-like 486 975 - -
Stsc66g00004 1192 Pfam Rx N-terminal domain 14 97 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc66g00004 Stsc-Chr66 14013 17775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc66g00004 195 669 WRKY Transcription Factor Family AT5G45050 21.828 8.85e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc66g00004 - - ahf:112708719 1380.16