Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc66g00002 ATGGCTACAAAACTTGATGGTGGAGCTTATCTCTCTTCCTTTGTTGATGCTATTTTAGACAACTTGTCTTCAATGCTTGAAGATGACTCTATCCTCCATGGAAACCACTCTGCCTTGGAGTTGCTTCCAAGGTTAGAGAGTAGTCTGTATGATGTTCGACCTGTTCTTGATGATGCTGAGAACAAGCAGTTCACTGACAAGAGAGTCAAGAACTGGCTTACTGATCTCCAAGATGCTCTCTATTTTGCTGATGACTTGCTTGATGAACTCTCCACTAAAACTGCCACTGCCATTGCAAGGGATCCAGGTATGTCGTCGTATTGTTCTTCTGTTGTTGATTCATATGTTGAAAGCAGTGGTGACAAGGAAAACATAGTTCAAAGACTAGAGTCTGTTGTAGCACGCAAAAAATATTTTCGTCTGAGAGAGTCTGTCGAGGTGGATATGTTATCATGGAGAACTCCATCCACATCTCTCGTTGTAAGTTCTGACATATTTGGTCGAGACAAAGACAAGGAGGAGATAATCAAATTGCTGTTAGCTGATACTTGTCATGCTGAATCACCTTTTACTGTTATCCCAATTTGGGGTATGGGTGGAATAGGAAAAACTACCTTGGCTCAACTGGTTTACAGTGATCCCAAGGTGGTGGAAAATTTTGACATTAGAGTATGGGTGTGTGTAGCTGAAAATTCCGACCCTGTTCATGTTACAAGGACAATAATAGGGGCAATAGATTCCTGTCCTTTCTGCATAGACAATTTTGATGTTCTTCAGACTAATTTGAAGTACAAGTTGATGGGAAAGACATTCTTAGTTGTTTTAGACGATGTCTGGCATGGTGGACGAGACACATGGGAGAATCTTCTAAAACCTTTTCAATACGGGAATAATGGAAGTAAAATTCTATTAACAACCCGTAGTGAAAAGGTTGGCTCTATGTTCCTAGCTGCTAGTCAACATTATCGTCTTGGTTTATTGTCCGACAAAGATTGTTGGTCATTGTTTGTGAAGCATTCATCTATTTCTACTAATTTAGAACAATATGCAACTCTTGAACAAATTGGTAGAAAAATTGTTGACAAGTGTAAAGGATTACCTTTGGCAGTAAAGACGCTAGGAGGTTTATTGCGCAACAAGTTTGACATAGAGGTCTGGGAGAAAATACTTGAAAGCGAGATTTGGGAGCTCCCACAAGATGAAAATGAGATTGTTCCAGCACTACGAAATTTGGCAACCAACGCATGGTCGACAGCAAAACTCGCCATTTGTCTTCTGATTGGGATCAAATCTCAAGATTCCCAGAGGCCTGCGATGGAGCAATATTGTAAAATCCGGTCGTTGTCTGATTCAATAGGTGAATTGCTTCATTTGCGATATTTGAATTTCTCTGAAACACCTATTGTCACATTGCCTGAATCATTGTGTAAATTATACAATCTCCAAACATTGAAGTTGAGAGATTGTAATTCTCTGGAGATGCTTCCCAGCCGCATGCAAGATCTTGTGAACCTGCGCCACCTTGATATCAGAGGAACGCATCATTTGAAAGAGATGCCGAAGGGAATGAGCAAGCTAAAACACTTGAATTTATTAGGATGCTATGTTGTGGGGGAGCATGAAGAGAATGGGATAAGAGAACTGGGACCAATTGATGTTCATGGCTCATTTTACATTTTCAAATTAGAGAATGTCAACAGCAGCAGCGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACATTTTACTATTGGCCTGGCGTTCAGATGGTGATACTGTGGATGTTGAAACTGAAAGAGATATACTTAAAGAGTTACGACCTCATCAAAACTTGAAGGAGCTATCAATTGAACGTTATAGGGGTGAAATATTCCCCGATTGGTTAGGCCTTTCTTGCTACTCTAATATAACCAAATTGAAAATGTTTGGTTGTAAGAATTGTCGTCAGCTTCCTTCACTTGGACAGTTACCCTCTCTGCAGCATCTGGAGATCGCTGCACTGCATGGGTTGGAGAGAATTGGTGAGGAGTTTTACAAGAGCTGTGAATCATGCCATGTGGGGACACCCTTCAGGTCTCTTGAATACCTGAATTTTTGTCACATGAAAGGTTGGCGAGAGTGGCATACTCCTGATAAGTTGGATGCATTTCCTAAACTTAAAACCCTTTCAATGCATTACTGTCCGGTGTTAAGTGGAGATCTTCCTGCTCGCCTTCCGGCTCTGAAGCAACTTGAAATTAATCTTTGCGAAGAGCTTGCATATTCGCTGCTGAAAGCTCCCAAGCTCCACACAATAACTGTAAACGGTTGGCTGGATTCATTGACAAGAGCGGCACCGCACGAGGTAAGAATTGACCACACTAAGCAGGTGCAGTCCGTATTGGAGTTGCTTCGCCATGTCCAACCGCCATGTTTGCAACGTTTGAAAATCGATAGTTGTTGGTCAGCCATAACACTTTCCGGAGATTATTTGCCCCCTTCATTACAATATCTGGTAATCAAGAATTGTTCAGAATTAACATTCCCAGAGCCACTGGAACACCAGTTGCTAACGGAGATACATTTGTACAACTGTGATTCAGTGACGTCGTTGCCGTTGGGGGCCCTTCCAAATCTCAAGAAACTTGCAACCCCAAATAGTAGGATTGTTTTGGAGAGGAATGCCTCCCACCGAGCTTGA 2688 0.4182 MATKLDGGAYLSSFVDAILDNLSSMLEDDSILHGNHSALELLPRLESSLYDVRPVLDDAENKQFTDKRVKNWLTDLQDALYFADDLLDELSTKTATAIARDPGMSSYCSSVVDSYVESSGDKENIVQRLESVVARKKYFRLRESVEVDMLSWRTPSTSLVVSSDIFGRDKDKEEIIKLLLADTCHAESPFTVIPIWGMGGIGKTTLAQLVYSDPKVVENFDIRVWVCVAENSDPVHVTRTIIGAIDSCPFCIDNFDVLQTNLKYKLMGKTFLVVLDDVWHGGRDTWENLLKPFQYGNNGSKILLTTRSEKVGSMFLAASQHYRLGLLSDKDCWSLFVKHSSISTNLEQYATLEQIGRKIVDKCKGLPLAVKTLGGLLRNKFDIEVWEKILESEIWELPQDENEIVPALRNLATNAWSTAKLAICLLIGIKSQDSQRPAMEQYCKIRSLSDSIGELLHLRYLNFSETPIVTLPESLCKLYNLQTLKLRDCNSLEMLPSRMQDLVNLRHLDIRGTHHLKEMPKGMSKLKHLNLLGCYVVGEHEENGIRELGPIDVHGSFYIFKLENVNSSSEALEAKMGNKKHINILLLAWRSDGDTVDVETERDILKELRPHQNLKELSIERYRGEIFPDWLGLSCYSNITKLKMFGCKNCRQLPSLGQLPSLQHLEIAALHGLERIGEEFYKSCESCHVGTPFRSLEYLNFCHMKGWREWHTPDKLDAFPKLKTLSMHYCPVLSGDLPARLPALKQLEINLCEELAYSLLKAPKLHTITVNGWLDSLTRAAPHEVRIDHTKQVQSVLELLRHVQPPCLQRLKIDSCWSAITLSGDYLPPSLQYLVIKNCSELTFPEPLEHQLLTEIHLYNCDSVTSLPLGALPNLKKLATPNSRIVLERNASHRA 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc66g00002 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 409 IPR027417 -
Stsc66g00002 895 Gene3D - 326 406 IPR042197 -
Stsc66g00002 895 Pfam Rx N-terminal domain 14 95 IPR041118 -
Stsc66g00002 895 SUPERFAMILY L domain-like 442 874 - -
Stsc66g00002 895 Gene3D Ribonuclease Inhibitor 436 795 IPR032675 -
Stsc66g00002 895 Gene3D - 15 121 - -
Stsc66g00002 895 PANTHER DISEASE RESISTANCE PROTEIN RP 444 701 IPR044974 GO:0006952
Stsc66g00002 895 Gene3D - 149 318 IPR027417 -
Stsc66g00002 895 Pfam NB-ARC domain 169 391 IPR002182 GO:0043531
Stsc66g00002 895 PRINTS Disease resistance protein signature 476 492 - -
Stsc66g00002 895 PRINTS Disease resistance protein signature 192 207 - -
Stsc66g00002 895 PRINTS Disease resistance protein signature 265 279 - -
Stsc66g00002 895 PRINTS Disease resistance protein signature 363 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc66g00002 Stsc-Chr66 5966 9046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc66g00002 177 380 WRKY Transcription Factor Family AT5G45050 27.523 1.06e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc66g00002 - - adu:107476306 790.03