Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc667g00003 ATGGCTTCTAATAACCAAGAAGTGCTGCTTTTTGCTGTCACACTCACTCTTTTGTTGCGGCTACTACCATCTCAGATTGAAGCTGTTGGTTCAAAAGTTGAAAGGCTTCCTGGTTTTGATGGACCACTTCCCTTTCATCTTGAAACTGGGTATATTGGGTTGGGGGATTCAGATGATGACATGCAAGTGTTCTACTATTTTGTTAAATCAGAGAATGATCCTCAGAATGACCCTCTTTTGCTATGGCTCACCGGTGGCCCCGGGTGTTCTTCATTTTCGGGACTTGTTTATCAAATAGGTCCAGTGAAGTTCAAAATTGAGGAATATGATGGGAGCTTGCCTAAGCTGATCCTGAGGCCACAGTCATGGACAAAGGTGGCTAACATTATTTTTGTGGATTTGCCAATGGGAACTGGCTACTCTTACACGAAAACTGTCCTTGGCCATCGAAGTGACTGGAAGATGGTTCACCAAACCCATCGGTTTATTAGAAAGTGGCTTGCTGAGAACCCGGAATTTCTTTCGAATAAGTTCTACATGGCAGCTGATTCATACTCCGGCATTCCAGTTCCTCCTATTACTCAAGAGATCGCAGATGGAAATGAAAGGGGTCTCGAACCCCGGATAAATCTACAGGGATATATACTAGGAAACCCTCTAACATCAGGATTAGAAAATAATGATCGGATCCCGTATGTTCATGGAATGGGACTTATCTCTGATGAACTCTATTTGTCCTTGAAACAAAACTGTAACGGGGACATTATAAATGTGGATTCTACAAACGAATTGTGTCTTAATGACATGCAGTACTATTATAAGCTTCTTGAAAATGTTGAGTTGTACAACATTTTGGAGATCTATTGTGTCGATGAGAAACTCGAAGGAACAAGATGGAACCGCAGAAGATCTGTTGCTGAGAAGATTAAGGCCCCTTTGATTTCTTCTGTCACGGTGCCGGATATGCGCTGCCAAATCCATGGTTTCTTCCTTGGTACGGAATGGATGAATGATCCCGCTGTTCGCAAGGCACTGCATATTCGAGAGGGATCTATAGGGAAATGGACTCGGTGCTACAAAGACAATTATGTATATGATATCCCTAGTAGCGTTCCCTTTCATGCAAATCTCAGTGCCAAAGGCTACCCTTCTTTGATATACAGTGGGGATCACGACGCAGTCGTTCCTTTCTCGTCGACTCAGCGATGGATAAGGTCTCTAAACTACTCCATCGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACCAGGACTTACTCAAATCAAATGACATTTGCAACTATAAGGGGTGCAGGGCATACAGCTCCAGAGACCAAGCCAGAAGAAGGTTTCGTCATGTTCGTTAGATGGATATCAAATAAGCCTCTTTAA 1407 0.4307 MASNNQEVLLFAVTLTLLLRLLPSQIEAVGSKVERLPGFDGPLPFHLETGYIGLGDSDDDMQVFYYFVKSENDPQNDPLLLWLTGGPGCSSFSGLVYQIGPVKFKIEEYDGSLPKLILRPQSWTKVANIIFVDLPMGTGYSYTKTVLGHRSDWKMVHQTHRFIRKWLAENPEFLSNKFYMAADSYSGIPVPPITQEIADGNERGLEPRINLQGYILGNPLTSGLENNDRIPYVHGMGLISDELYLSLKQNCNGDIINVDSTNELCLNDMQYYYKLLENVELYNILEIYCVDEKLEGTRWNRRRSVAEKIKAPLISSVTVPDMRCQIHGFFLGTEWMNDPAVRKALHIREGSIGKWTRCYKDNYVYDIPSSVPFHANLSAKGYPSLIYSGDHDAVVPFSSTQRWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNQMTFATIRGAGHTAPETKPEEGFVMFVRWISNKPL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc667g00003 468 Gene3D - 331 468 - -
Stsc667g00003 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Stsc667g00003 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Stsc667g00003 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Stsc667g00003 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Stsc667g00003 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 452 IPR001563 GO:0004185|GO:0006508
Stsc667g00003 468 SUPERFAMILY alpha/beta-Hydrolases 33 467 IPR029058 -
Stsc667g00003 468 Gene3D alpha/beta hydrolase 27 299 IPR029058 -
Stsc667g00003 468 Pfam Serine carboxypeptidase 37 465 IPR001563 GO:0004185|GO:0006508
Stsc667g00003 468 FunFam Serine carboxypeptidase-like 11 27 468 - -
Stsc667g00003 468 FunFam Carboxypeptidase 323 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc667g00003 Stsc-Chr667 22550 27895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc667g00003 335 468 Calmodulin-binding Proteins AT2G22960 64.444 5.31e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc667g00003 K16296 - gmx:100780069 668.692