Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc656g00001 ATGGGAGAGAGAGGGAGTGAGGGTTCGTCTACGACGCTGCTGCAGGGAAAGTATGAGTTAGGGAGGCTTCTTGGAACGGGAACGTTCGCGAAGGTGTACCACGCGCGGAACGTGGAAACCGGAAAGAGCGTCGCCATGAAGGTGGTTGGGAAAGAGAAGGTCATTAAGGTTGGGATGATGGAGCAGATCAAGAGAGAGATCTCCGTCATGAAGATGGTGAACCATCCACACATCGTTGCGCTTCACGAAGTAATGGCCTCCAAATCCAAGATCTACATCGCCATGGAGCTCGTTCGCGGCGGTGAGCTTTTCAACAAGATCGCCACAAGAGGACGCATGAGGGAGGATCTTGCCAGGCTCTACTTCCACCAGCTCATCTCCGCGGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGATCTCAAGCCGGAGAATCTCCTTCTTGACCACAACGGCAACCTTAAGGTCTCTGACTTTGGACTCAGCACTTTCGCCGAGCATCTCCGCCAGGACGGCTTGTTGCACACAACTTGCGGCACTCCGGCTTATGTCTCGCCGGAGGTGCTCGCGCGGAAGGGATACGACGGCGCCAAGGCGGACATATGGTCCTGCGGCGTCATCCTGTTCGTTCTTCTTGCAGGTTGCTTGCCGTTTCAGGATGATAACCTTGTTGCGATGTACAAGAAGATTTACAGAGGAGATTTCAAGTGTCCGCCGTGGTTTTCCGGCGATGCAAGGAGGCTAATCATGAAGCTTCTCGATCCGAATCCGAATACTCGCATCACCATATCAAAAATCATGGAGTCGCCGTGGTTCAAGAAGCCTGTTCCGAAGAACATGCTGCGGGGGATGAAGGAGGAAGATGAAGAGGAGAAGGAGAAAGAGAAAGAGGAGAAGATGAAGCAGCCTTCTACCATGAACGCATTTCACATCATATCGTTATCGGAAGGGTTTGATTTGTCGAGGTTGTTCGAGGAGAAGAAGAGGGAGGAGAGGGAGGAGATGAGGTTCGCGACGGCGGGGACGGCGAGCAGTGTGATATCTCGGCTGGAGGAGGTGGCGAAGGCTGTGAAGTTCGACGTGAAGAGGAACAGCGATGAGACGAAGGTGAGGCTGCAGGGGCAGCAGAGAGGGAGGAAGGGGAAGCTCGCAATTGCGGCGGATATATACGCCGTGACGCCGTCTTTTCTGGTGGTGGAGGTGAAGAAGGACAACGGTGACACCTTGGAGTACAACCAGTTCTGCAGCAAGGAGCTTCGCCCTGCACTCAAGGATATCTTCTGGACTTCCCCACCTGAGAATACCACACCCGCTTAA 1320 0.5432 MGERGSEGSSTTLLQGKYELGRLLGTGTFAKVYHARNVETGKSVAMKVVGKEKVIKVGMMEQIKREISVMKMVNHPHIVALHEVMASKSKIYIAMELVRGGELFNKIATRGRMREDLARLYFHQLISAVDFCHSRGVYHRDLKPENLLLDHNGNLKVSDFGLSTFAEHLRQDGLLHTTCGTPAYVSPEVLARKGYDGAKADIWSCGVILFVLLAGCLPFQDDNLVAMYKKIYRGDFKCPPWFSGDARRLIMKLLDPNPNTRITISKIMESPWFKKPVPKNMLRGMKEEDEEEKEKEKEEKMKQPSTMNAFHIISLSEGFDLSRLFEEKKREEREEMRFATAGTASSVISRLEEVAKAVKFDVKRNSDETKVRLQGQQRGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIFWTSPPENTTPA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc656g00001 439 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc656g00001 439 Coils Coil 279 299 - -
Stsc656g00001 439 Pfam NAF domain 304 363 IPR004041 GO:0007165
Stsc656g00001 439 SUPERFAMILY Protein kinase-like (PK-like) 15 280 IPR011009 -
Stsc656g00001 439 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Stsc656g00001 439 MobiDBLite consensus disorder prediction 284 303 - -
Stsc656g00001 439 CDD CIPK_C 308 425 - -
Stsc656g00001 439 Gene3D Transferase(Phosphotransferase) domain 1 100 303 - -
Stsc656g00001 439 Gene3D Kinase associated domain 1, KA1 304 430 - -
Stsc656g00001 439 SMART serkin_6 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc656g00001 439 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Stsc656g00001 439 ProSiteProfiles Protein kinase domain profile. 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc656g00001 439 FunFam Non-specific serine/threonine protein kinase 302 429 - -
Stsc656g00001 439 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Stsc656g00001 439 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 426 - -
Stsc656g00001 439 FunFam Non-specific serine/threonine protein kinase 8 303 - -
Stsc656g00001 439 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Stsc656g00001 439 CDD STKc_SnRK3 17 272 - -
Stsc656g00001 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc656g00001 Stsc-Chr656 4141 6127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc656g00001 3 433 CBL-interacting serine-threonine protein kinases AT4G30960 73.874 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc656g00001 Pkinase 7.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc656g00001 - K07198 gmx:547644 688.723