Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc65277g00001 ATGATGCAGTGTGAGATTCTTGAATCTCCATCTTCATTCTCTGCTGATCCTTGTTATTATGGATTGAGCAGCATGGATGAAGATGATTGTGGATTCAGTGCCATATTCAACACCAGTGAATATGATGATCACATTGAATACACAATTGGTGATGAAACCTTGCAACTCCAATCCTTGATCCCTGATTTCCAAATGGAATTTCTTGAGAGTGAAGGAACCATCATCCCTTCTTCACATCAAGAAGCATATAGTCCCACCCAATCATTCACTTCACACTTGTCGTCATCATCATCATCATCAGTAACTCAACAACCATGGATGGTACCACTCAACTTGCCACAACCAAACATGCAAATTGAAAACCACTTGATCCTTCCTCACATGCTGGAAGCCATTGGAGAGGCCTTGGAGAATGGACACAGAGCTCTTGCTGAAGAGGTCTTGAGATGCATCAACAACAAACTTAGCCCTCTCTCTCAAACTCTTGATGATCGCCTCCACTTTTACATGTCGCTACCGGCCACCGGCGACAACGGAGACTATTTGAAAGGGGAAGCTTTGAAGAACTCTGAGGGTGCTTTCAGGGCATTCTATGAAGCCACCCCTTTCGGAAAATTCGCTCACTTTGCGGCCCTTTCAGCAATCCTTGAAAGCATGCCTCCACACTGTGATTCCGTACATGTGGTGGACTCTGACATGGGAATTGGGATTCAATGGATTCCAATGATTCATGCCATGGCTCTCAGGAACATCAAAATCATGAAACTCACAGCCGTCAGTTTGGGTGATCAGCAAGGGCTTTATGGTAATTCCACTGCTCCTTGTATTTCTGAGGAAACTAAGAGGCATCTCTATGAGTATGCAAGATCATGTGGCTTGAATCTCATGGTGGAGGAAAAGGGAATTCAGGAACTTGTTTTTGAGTTCAAGAATTTGAAGAAAAGAGGTGGCAGTGGCATGAGAGAGTTTTTGGCATTCAATTCCACGCTTCACTTTCCACATATGGCCAAAAGAAGCAGCAGAAAACAAGCCTTGGAATTTCTGAGGTTGGCTAAGGATTTGATCAATGATTCTGGGAACAAGGGAATCATCACTTTTGGTGATTGTGATGCATCTCAGAAACTCAACAACACCATGAATTTCAAGTCATTCTTTTATGGTCATTTGGTGTATTATCATGCCTTATTGGAATCAATTGAGTCAAGTTTTCCAATTAATTTCTCAGAGGCAAGGACTCTTATGGAGTCCCTGTTTGTGGCACCTTATGTCTCTCCTTTTTCTTGGTTACAAACTTGGGAAGAAATAGAAAGGGATTCTTGCCATGTTGATGTTGGATTAGAAGGTTGCAGATTGAGCACAAGTATTTTAATGGAAGTAAGAGAAATGTTAAGATGTAATGGAGGTTCATATGAGACAAGGATTGAAGGTCAAAATGGGAATGAAATTGTTCTGGCATGGAAAGGAACAGAATTAGTCAGAGTTTCTGCTTGGAAAAACTAA 1500 0.4187 MMQCEILESPSSFSADPCYYGLSSMDEDDCGFSAIFNTSEYDDHIEYTIGDETLQLQSLIPDFQMEFLESEGTIIPSSHQEAYSPTQSFTSHLSSSSSSSVTQQPWMVPLNLPQPNMQIENHLILPHMLEAIGEALENGHRALAEEVLRCINNKLSPLSQTLDDRLHFYMSLPATGDNGDYLKGEALKNSEGAFRAFYEATPFGKFAHFAALSAILESMPPHCDSVHVVDSDMGIGIQWIPMIHAMALRNIKIMKLTAVSLGDQQGLYGNSTAPCISEETKRHLYEYARSCGLNLMVEEKGIQELVFEFKNLKKRGGSGMREFLAFNSTLHFPHMAKRSSRKQALEFLRLAKDLINDSGNKGIITFGDCDASQKLNNTMNFKSFFYGHLVYYHALLESIESSFPINFSEARTLMESLFVAPYVSPFSWLQTWEEIERDSCHVDVGLEGCRLSTSILMEVREMLRCNGGSYETRIEGQNGNEIVLAWKGTELVRVSAWKN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc65277g00001 499 Pfam GRAS domain family 187 498 IPR005202 -
Stsc65277g00001 499 ProSiteProfiles GRAS family profile. 116 498 IPR005202 -
Stsc65277g00001 499 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 105 491 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc65277g00001 Stsc-Chr65277 210 1709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc65277g00001 192 498 GRAS Transcription Factor Family AT3G60630 26.531 8.23e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc65277g00001 GRAS 9.3e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc65277g00001 - - adu:107485006 710.679