Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc64g00003 ATGAACGGCGCAGGGCCCACAGCCACAGCCACCGCCACCGCCACCTTCAGGAACATCCTCGACAAGCCCCTTCACCAGCTCACCGAAGATGACATTTCCCAGCTCACCCGTGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCGTGGAACAAATCGCAGGCAATTCAGCAGGTCATTTCCCTCAAGGCGCTGCTTGAGCCCCCTAACGACGACGCCCCCGCCGCCGTTCCCACCCACCATTCTACCTCTCCACCTCAGCCTCAGCCTCAAGGGAATTTGAACGATGCTCCGCCTGCTGAAGAGGCAGCTCCTCAAGCTGCCGATGAGATTCAGAAATCTCCGTCGTCTCCGGAAAAACCCACTGAAACCAATGACACCAATGCTGTGAGCCCCAGAGCATGTGCAACTAGCGGAGTTGGGCAAATGACAATATTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCCCACCTGATAAGGCACAAGCTATCATGCACCTGGCAGCAAGTCCAGTCCAATTTGCTCAGGATGATCCTGTAAACAGAAGTACAGCAGTTTGGACTTCTCCTTGTCACATACCGTTGGATAAGGATGCCCCAGTTCCTGTTGATACAACAATGGTGCAGGTTGCTCAAGCAGATAAGATGATGGAATATCCTCTGCATTACAGGGAGAAAGGAAGCATAGCTCGCGATGGTGATCTAGATGGTCAAGCAAGCAGAAAAGAGTCATTGCAACGGTATCGTGAAAAGCGAAAAGACAGGGGAAGATTGAAGGGCAAGAAATTGCCTGGGGTAACTCCATCTAACTTGGAGATGTATTTGAAGCTTCCAGCAAAAATCCAGACCTCAAATGGCAACTCAAGCCGAAGTAGCACATGCTCTCCGCCACAGCCTAGACTGCCTCTGTCTTTCAGTGGCTCAGCTGACAACCAGCTAAAAGTTGCTCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1005 0.5075 MNGAGPTATATATATFRNILDKPLHQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPPNDDAPAAVPTHHSTSPPQPQPQGNLNDAPPAEEAAPQAADEIQKSPSSPEKPTETNDTNAVSPRACATSGVGQMTIFYCGKVNVYDGVPPDKAQAIMHLAASPVQFAQDDPVNRSTAVWTSPCHIPLDKDAPVPVDTTMVQVAQADKMMEYPLHYREKGSIARDGDLDGQASRKESLQRYREKRKDRGRLKGKKLPGVTPSNLEMYLKLPAKIQTSNGNSSRSSTCSPPQPRLPLSFSGSADNQLKVALPIDLNDKDVQEC 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc64g00003 334 SMART tify_2 140 175 IPR010399 -
Stsc64g00003 334 MobiDBLite consensus disorder prediction 235 274 - -
Stsc64g00003 334 MobiDBLite consensus disorder prediction 66 138 - -
Stsc64g00003 334 Pfam tify domain 145 174 IPR010399 -
Stsc64g00003 334 ProSiteProfiles Tify domain profile. 140 175 IPR010399 -
Stsc64g00003 334 MobiDBLite consensus disorder prediction 235 256 - -
Stsc64g00003 334 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 272 IPR040390 -
Stsc64g00003 334 MobiDBLite consensus disorder prediction 287 312 - -
Stsc64g00003 334 MobiDBLite consensus disorder prediction 114 138 - -
Stsc64g00003 334 Pfam Jas motif 243 260 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc64g00003 Stsc-Chr64 13049 17596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc64g00003 11 303 Tify Gene Family AT4G14720 43.038 6.36e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc64g00003 tify 4.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc64g00003 - - adu:107467071 468.774