Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc64959g00001 ATGATTCAACCTCAAACCCATTTGAATGTAGCCGATAACAGCGGAGCCCGCCAATTGATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAGTATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAG 360 0.3972 MIQPQTHLNVADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc64959g00001 120 Pfam Ribosomal protein L14p/L23e 1 120 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc64959g00001 120 Gene3D Ribosomal protein L14 1 120 IPR036853 GO:0003735|GO:0005840|GO:0006412
Stsc64959g00001 120 SUPERFAMILY Ribosomal protein L14 1 119 IPR036853 GO:0003735|GO:0005840|GO:0006412
Stsc64959g00001 120 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 120 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc64959g00001 120 Hamap 50S ribosomal protein L14 [rplN]. 1 119 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc64959g00001 120 FunFam 50S ribosomal protein L14, chloroplastic 1 120 - -
Stsc64959g00001 120 NCBIfam 50S ribosomal protein L14 1 120 IPR005745 GO:0003735|GO:0006412|GO:0015934
Stsc64959g00001 120 SMART Ribosomal_L14_2 1 120 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc64959g00001 120 ProSitePatterns Ribosomal protein L14 signature. 60 86 IPR019972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc64959g00001 Stsc-Chr64959 519 878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc64959g00001 8 118 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.522 5.26e-18 72.4