Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc64683g00001 ATGATCAGTCTCCATGATCATGTTCTTGCTGCTCCTCCACTGAGCCAATCCACGTCTCCTTACATAAACCTCATAGCAAACTTGAGCATCAAGAAAAGGAAGATTGCCCATCGCTCACGTTCTGCACCGACCGTACTAGTCACCGATGCTGGCATAGACTTTGATGAGCCCTCTGAACCTAGATCTATACAAAAGTCATCAACCTTAATAGTAAGGGTATCTTTCATCTCTGTATTCTTGTATTTAGCAATAGGTGTTGCAGTGTACATGATAAATGGGAGTTTTAAGGGTACTACTACACTTATGCCTATAGATGCTATATACTTTACTGTTGTAACTCTATGCACAATTGGATATGGAGATATTGTTCCTGATGCTACATCTACTAAAATCTTTACCTGTGGTTTCATTTTGGTTGGTTTCGGACTTATCGGTTTTCTCCTTAGCGGCTTGGTCGAATACATCTGCGACGCTCAAGAAGCATTCACATTGAGCATGATTGATGAGAATAGATATGAGAGAATTCTCTGGACCTACATAGTTGATGAAGAGAAAGGAAGAATGCGAATTCGGACAAAAGTTTCTTTAGCTTTGGTGGTTGTCATTGGTTGCATTACAATAGGAGCAGTTACTGCTCACTTTCTTGAGGGTATGGATTGGATAGATAGTTTTTATCTCTCCATTACTTCTGTTACGACAGTTGGTTATGGAGATTATTCTTTCAAAACTGTAACCGGAAGATGCTTTGCGATCATATGGCTTTTGGTAAGTACATTGGCAGTTGCTAGAGCCTTTCTGTACCTCACTGATTATAGCATGCACAAGAGGAAACGTAACATGGCAAAATTGGTTCTTCATAAGAAGATAACATTGTCAGATTTAGTAGCAGCAGACATTGATAATGATGGATCAATAAGGTATGCTTAA 927 0.3937 MISLHDHVLAAPPLSQSTSPYINLIANLSIKKRKIAHRSRSAPTVLVTDAGIDFDEPSEPRSIQKSSTLIVRVSFISVFLYLAIGVAVYMINGSFKGTTTLMPIDAIYFTVVTLCTIGYGDIVPDATSTKIFTCGFILVGFGLIGFLLSGLVEYICDAQEAFTLSMIDENRYERILWTYIVDEEKGRMRIRTKVSLALVVVIGCITIGAVTAHFLEGMDWIDSFYLSITSVTTVGYGDYSFKTVTGRCFAIIWLLVSTLAVARAFLYLTDYSMHKRKRNMAKLVLHKKITLSDLVAADIDNDGSIRYA 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc64683g00001 308 Pfam Ion channel 77 155 IPR013099 -
Stsc64683g00001 308 Pfam Ion channel 200 271 IPR013099 -
Stsc64683g00001 308 PRINTS Two pore domain K+ channel signature 232 241 IPR003280 GO:0005267|GO:0016020|GO:0071805
Stsc64683g00001 308 PRINTS Two pore domain K+ channel signature 112 140 IPR003280 GO:0005267|GO:0016020|GO:0071805
Stsc64683g00001 308 FunFam Two-pore potassium channel 2-like 172 296 - -
Stsc64683g00001 308 SUPERFAMILY Voltage-gated potassium channels 67 155 - -
Stsc64683g00001 308 SUPERFAMILY Voltage-gated potassium channels 171 288 - -
Stsc64683g00001 308 Gene3D - 59 175 - -
Stsc64683g00001 308 Gene3D - 181 293 - -
Stsc64683g00001 308 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 43 124 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc64683g00001 Stsc-Chr64683 801 1727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc64683g00001 37 308 Ion Channels AT4G18160 48.352 2.00e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc64683g00001 K05389 - gmx:100789639 427.943